FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0040238 through 18771 annotations produced 1 hits

Bestrophin 1 (Best1):

Annotation Number : CG6264
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040238
Gbrowse : chr3R:5987185-5996207 (-) // 100.0 //
Probeset : 1627617_at
Accessions : protein= NP_001138033; /// NP_652603;, nucleotide= NM_001144561; /// NM_144346;
Interpro : 0005254 // chloride channel activity // non-traceable author statement
FlyMine data for FBgn0040238.
Homophila reports that CG6264 is a close match (8e-108) to human gene ARB;BEST1;VMD2 (NP_004174), a gene associated with Bestrophinopathy, 611809 (3);Macular dystrophy, vitelliform type, 153700 (3);Maculopathy, bull's-eye, 153870 (3);Vitelliform macular dystrophy, adult-onset, 608161 (3).
BioGrid reports that CG6264 interacts with CG7780 .
VDRC has 1 RNAi stocks for FBgn0040238 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	144 ± 2	4 of 4	0.90	None
Head	158 ± 9	4 of 4	1.00	None
Eye	60 ± 3	4 of 4	0.37	Down
Thoracicoabdominal ganglion	270 ± 10	4 of 4	1.70	Up
Salivary gland	133 ± 8	4 of 4	0.82	None
Crop	551 ± 15	4 of 4	3.40	Up
Midgut	79 ± 4	4 of 4	0.50	Down
Tubule	551 ± 105	4 of 4	3.40	Up
Hindgut	644 ± 25	4 of 4	3.90	Up
Heart	148 ± 21	4 of 4	0.91	None
Fat body	90 ± 13	4 of 4	0.55	Down
Ovary	428 ± 3	4 of 4	2.60	Up
Testis	25 ± 1	4 of 4	0.20	Down
Male accessory glands	274 ± 7	4 of 4	1.70	Up
Virgin spermatheca	153 ± 9	4 of 4	0.94	None
Mated spermatheca	179 ± 11	4 of 4	1.10	None
Adult carcass	95 ± 2	4 of 4	0.60	Down
Larval CNS	65 ± 12	4 of 4	0.40	Down
Larval Salivary gland	26 ± 2	4 of 4	0.16	Down
Larval midgut	155 ± 12	4 of 4	0.95	None
Larval tubule	300 ± 18	4 of 4	1.80	Up
Larval hindgut	405 ± 21	4 of 4	2.48	Up
Larval fat body	23 ± 4	4 of 4	0.10	Down
Larval trachea	150 ± 26	4 of 4	0.92	None
Larval carcass	82 ± 4	4 of 4	0.50	Down
S2 cells (growing)	435 ± 17	4 of 4	2.67	Up
Whole fly	163 ± 10	4 of 4

Looking for FBgn0040238. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720