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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0040251 through 18771 annotations produced 1 hits



Ugt86Di (Ugt86Di):

Annotation Number : CG6658
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040251
Gbrowse : chr3R:6977690-6979518 (-) // 100.0 //
Probeset : 1641242_at
Accessions : protein= NP_652620;, nucleotide= NM_144363;
Interpro : "0015020 // glucuronosyltransferase activity // inferred from sequence or structural similarity /// 0015020 // glucurono
FlyMine data for FBgn0040251.
Homophila reports that CG6658 is a close match (1e-49) to human gene GNT1;UGT1;UGT1A1 (NP_000454), a gene associated with Crigler-Najjar syndrome, type I, 218800 (3);Crigler-Najjar syndrome, type II, 606785 (3);Hyperbilirubinemia, familial transcient neonatal, 237900 (3);[Gilbert syndrome], 143500 (3).
VDRC has 3 RNAi stocks for FBgn0040251 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain46 ± 24 of 4 5.20Up
Head18 ± 24 of 4 2.10Up
Eye9 ± 23 of 4 1.09None
Thoracicoabdominal ganglion39 ± 04 of 4 4.40Up
Salivary gland11 ± 51 of 4 1.30None
Crop9 ± 13 of 4 1.10None
Midgut19 ± 14 of 4 2.20Up
Tubule6 ± 01 of 4 0.80Down
Hindgut8 ± 04 of 4 0.90None
Heart5 ± 01 of 4 0.61None
Fat body10 ± 43 of 4 1.14None
Ovary5 ± 14 of 4 0.70None
Testis5 ± 02 of 4 0.70None
Male accessory glands12 ± 14 of 4 1.40None
Virgin spermatheca4 ± 11 of 4 0.44Down
Mated spermatheca6 ± 02 of 4 0.76None
Adult carcass9 ± 30 of 4 1.10None
Larval CNS95 ± 114 of 410.65Up
Larval Salivary gland5 ± 11 of 4 0.62None
Larval midgut19 ± 24 of 4 2.12Up
Larval tubule4 ± 02 of 4 0.50None
Larval hindgut11 ± 14 of 4 1.26None
Larval fat body8 ± 11 of 4 0.90None
Larval trachea22 ± 74 of 4 2.55Up
Larval carcass10 ± 22 of 4 1.21None
S2 cells (growing)8 ± 13 of 4 0.94None
Whole fly9 ± 14 of 4

Looking for FBgn0040251. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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