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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0040253 through 18771 annotations produced 1 hits



Ugt86Dg (Ugt86Dg):

Annotation Number : CG17200
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040253
Gbrowse : chr3R:6990144-6991796 (-) // 100.0 //
Probeset : 1633719_at
Accessions : protein= NP_652622;, nucleotide= NM_144365;
Interpro : "0005515 // protein binding // inferred from physical interaction /// 0015020 // glucuronosyltransferase activity // inf
FlyMine data for FBgn0040253.
Homophila reports that CG17200 is a close match (8e-51) to human gene GNT1;UGT1;UGT1A1 (NP_000454), a gene associated with Crigler-Najjar syndrome, type I, 218800 (3);Crigler-Najjar syndrome, type II, 606785 (3);Hyperbilirubinemia, familial transcient neonatal, 237900 (3);[Gilbert syndrome], 143500 (3).
VDRC has 1 RNAi stocks for FBgn0040253 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 11 of 4 0.50None
Head3 ± 11 of 4 0.50None
Eye2 ± 00 of 4 0.41None
Thoracicoabdominal ganglion5 ± 02 of 4 0.90None
Salivary gland8 ± 10 of 4 1.35None
Crop5 ± 11 of 4 0.80None
Midgut22 ± 14 of 4 3.60Up
Tubule12 ± 13 of 4 2.00Up
Hindgut5 ± 01 of 4 0.80None
Heart3 ± 11 of 4 0.55None
Fat body5 ± 41 of 4 0.86None
Ovary2 ± 01 of 4 0.40None
Testis2 ± 12 of 4 0.50None
Male accessory glands8 ± 20 of 4 1.40None
Virgin spermatheca6 ± 13 of 4 0.98None
Mated spermatheca3 ± 00 of 4 0.63None
Adult carcass7 ± 31 of 4 1.10None
Larval CNS4 ± 12 of 4 0.73None
Larval Salivary gland1 ± 00 of 4 0.22Down
Larval midgut20 ± 43 of 4 3.31Up
Larval tubule5 ± 13 of 4 0.90None
Larval hindgut4 ± 00 of 4 0.69None
Larval fat body7 ± 21 of 4 1.30None
Larval trachea3 ± 10 of 4 0.61None
Larval carcass5 ± 11 of 4 0.88None
S2 cells (growing)4 ± 01 of 4 0.65None
Whole fly6 ± 13 of 4

Looking for FBgn0040253. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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