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FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0040256 through 18771 annotations produced 1 hits



Ugt86Dd (Ugt86Dd):

Annotation Number : CG6633
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040256
Gbrowse : chr3R:6952421-6954162 (-) // 100.0 //
Probeset : 1641481_at
Accessions : protein= NP_001097744;, nucleotide= NM_001104274;
Interpro : "0015020 // glucuronosyltransferase activity // inferred from sequence or structural similarity /// 0015020 // glucurono
FlyMine data for FBgn0040256.
Homophila reports that CG6633 is a close match (4e-52) to human gene GNT1;UGT1;UGT1A1 (NP_000454), a gene associated with Crigler-Najjar syndrome, type I, 218800 (3);Crigler-Najjar syndrome, type II, 606785 (3);Hyperbilirubinemia, familial transcient neonatal, 237900 (3);[Gilbert syndrome], 143500 (3).
VDRC has 2 RNAi stocks for FBgn0040256 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain95 ± 24 of 4 1.60Up
Head123 ± 64 of 4 2.00Up
Eye52 ± 114 of 4 0.87None
Thoracicoabdominal ganglion137 ± 84 of 4 2.30Up
Salivary gland272 ± 64 of 4 4.51Up
Crop61 ± 14 of 4 1.00None
Midgut661 ± 474 of 410.90Up
Tubule1569 ± 1364 of 426.00Up
Hindgut97 ± 124 of 4 1.60None
Heart221 ± 344 of 4 3.67Up
Fat body167 ± 524 of 4 2.77Up
Ovary1 ± 00 of 4 0.00Down
Testis10 ± 14 of 4 0.20Down
Male accessory glands6 ± 10 of 4 0.10Down
Virgin spermatheca219 ± 284 of 4 3.63Up
Mated spermatheca74 ± 184 of 4 1.23None
Adult carcass171 ± 214 of 4 2.80Up
Larval CNS9 ± 23 of 4 0.16Down
Larval Salivary gland1 ± 00 of 4 0.03Down
Larval midgut33 ± 24 of 4 0.56Down
Larval tubule200 ± 74 of 4 3.30Up
Larval hindgut9 ± 20 of 4 0.16Down
Larval fat body42 ± 64 of 4 0.70None
Larval trachea3 ± 21 of 4 0.06Down
Larval carcass0 ± 00 of 4 0.02Down
S2 cells (growing)5 ± 10 of 4 0.08Down
Whole fly60 ± 84 of 4

Looking for FBgn0040256. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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