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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0040261 through 18771 annotations produced 1 hits



Ugt36Bb (Ugt36Bb):

Annotation Number : CG13271
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040261
Gbrowse : chr2L:16796594-16798273 (+) // 100.0 //
Probeset : 1625402_at
Accessions : protein= NP_652628;, nucleotide= NM_144371;
Interpro : "0015020 // glucuronosyltransferase activity // inferred from sequence or structural similarity /// 0015020 // glucurono
FlyMine data for FBgn0040261.
Homophila reports that CG13271 is a close match (4e-42) to human gene GNT1;UGT1;UGT1A1 (NP_000454), a gene associated with Crigler-Najjar syndrome, type I, 218800 (3);Crigler-Najjar syndrome, type II, 606785 (3);Hyperbilirubinemia, familial transcient neonatal, 237900 (3);[Gilbert syndrome], 143500 (3).
VDRC has 3 RNAi stocks for FBgn0040261 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 11 of 4 0.80None
Head4 20 of 4 1.30None
Eye7 10 of 4 1.92None
Thoracicoabdominal ganglion1 00 of 4 0.30Down
Salivary gland10 30 of 4 2.95None
Crop4 11 of 4 1.20None
Midgut18 33 of 4 4.90Up
Tubule5 01 of 4 1.40Up
Hindgut4 11 of 4 1.20None
Heart2 00 of 4 0.64None
Fat body10 42 of 4 2.95Up
Ovary1 00 of 4 0.50None
Testis4 10 of 4 1.20None
Male accessory glands4 10 of 4 1.20None
Virgin spermatheca22 34 of 4 6.14Up
Mated spermatheca28 64 of 4 7.92Up
Adult carcass7 31 of 4 1.90None
Larval CNS6 13 of 4 1.86Up
Larval Salivary gland4 10 of 4 1.16None
Larval midgut5 20 of 4 1.48None
Larval tubule5 11 of 4 1.60None
Larval hindgut3 11 of 4 0.88None
Larval fat body9 10 of 4 2.60Up
Larval trachea2 10 of 4 0.77None
Larval carcass3 01 of 4 1.02None
S2 cells (growing)2 00 of 4 0.70None
Whole fly3 00 of 4

Looking for FBgn0040261. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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