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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0040262 through 18771 annotations produced 1 hits



Ugt36Ba (Ugt36Ba):

Annotation Number : CG13270
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040262
Gbrowse : chr2L:16794235-16795807 (+) // 100.0 //
Probeset : 1629836_at
Accessions : protein= NP_652629;, nucleotide= NM_144372;
Interpro : "0015020 // glucuronosyltransferase activity // inferred from sequence or structural similarity /// 0015020 // glucurono
FlyMine data for FBgn0040262.
Homophila reports that CG13270 is a close match (5e-51) to human gene GNT1;UGT1;UGT1A1 (NP_000454), a gene associated with Crigler-Najjar syndrome, type I, 218800 (3);Crigler-Najjar syndrome, type II, 606785 (3);Hyperbilirubinemia, familial transcient neonatal, 237900 (3);[Gilbert syndrome], 143500 (3).
BioGrid reports that CG13270 interacts with CG9986 .
VDRC has 3 RNAi stocks for FBgn0040262 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 10 of 4 0.70None
Head2 ± 10 of 4 0.50None
Eye3 ± 10 of 4 0.57None
Thoracicoabdominal ganglion1 ± 00 of 4 0.20None
Salivary gland9 ± 30 of 4 1.71None
Crop4 ± 00 of 4 0.80None
Midgut55 ± 24 of 4 9.70Up
Tubule6 ± 10 of 4 1.20None
Hindgut12 ± 10 of 4 2.20None
Heart0 ± 00 of 4 0.15None
Fat body9 ± 30 of 4 1.72None
Ovary0 ± 00 of 4 0.10None
Testis4 ± 10 of 4 0.70None
Male accessory glands5 ± 10 of 4 0.90None
Virgin spermatheca5 ± 00 of 4 0.90None
Mated spermatheca7 ± 30 of 4 1.22None
Adult carcass5 ± 30 of 4 0.90None
Larval CNS2 ± 20 of 4 0.46None
Larval Salivary gland3 ± 10 of 4 0.61None
Larval midgut84 ± 94 of 414.79Up
Larval tubule5 ± 10 of 4 0.90None
Larval hindgut5 ± 10 of 4 0.88None
Larval fat body6 ± 30 of 4 1.10None
Larval trachea4 ± 30 of 4 0.81None
Larval carcass2 ± 00 of 4 0.46None
S2 cells (growing)4 ± 10 of 4 0.86None
Whole fly5 ± 20 of 4

Looking for FBgn0040262. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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