FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0040291 through 18771 annotations produced 1 hits

Roc1b (Roc1b):

Annotation Number : CG16988
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040291
Gbrowse : chr3L:357980-358494 (+) // 100.0 //
Probeset : 1639817_at
Accessions : protein= NP_652613;, nucleotide= NM_144356;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural
Interpro : 0004842 // ubiquitin-protein ligase activity // inferred from direct assay /// 0004842 // ubiquitin-protein ligase activ
FlyMine data for FBgn0040291.
BDGP gene expression has embryonic in situ data for Roc1b: 2 pix of staining in 1 body parts.
BioGrid reports that CG16988 interacts with CG7375 CG11861 .
TRiP has 1 RNAi stocks for FBgn0040291 available for purchase.
VDRC has 2 RNAi stocks for FBgn0040291 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	11 ± 1	3 of 4	0.20	Down
Head	9 ± 2	0 of 4	0.20	Down
Eye	8 ± 1	1 of 4	0.14	Down
Thoracicoabdominal ganglion	14 ± 0	1 of 4	0.20	Down
Salivary gland	12 ± 4	0 of 4	0.19	Down
Crop	12 ± 1	0 of 4	0.20	Down
Midgut	6 ± 2	0 of 4	0.10	Down
Tubule	6 ± 0	0 of 4	0.10	Down
Hindgut	11 ± 2	0 of 4	0.20	Down
Heart	9 ± 2	1 of 4	0.14	Down
Fat body	9 ± 4	0 of 4	0.14	Down
Ovary	10 ± 1	3 of 4	0.20	Down
Testis	820 ± 25	4 of 4	13.00	Up
Male accessory glands	8 ± 3	0 of 4	0.10	Down
Virgin spermatheca	11 ± 2	0 of 4	0.18	Down
Mated spermatheca	10 ± 0	0 of 4	0.17	Down
Adult carcass	13 ± 3	0 of 4	0.20	Down
Larval CNS	12 ± 2	4 of 4	0.19	Down
Larval Salivary gland	9 ± 1	0 of 4	0.16	Down
Larval midgut	5 ± 1	0 of 4	0.09	Down
Larval tubule	9 ± 0	0 of 4	0.10	Down
Larval hindgut	10 ± 1	0 of 4	0.17	Down
Larval fat body	87 ± 43	3 of 4	1.40	None
Larval trachea	9 ± 4	1 of 4	0.15	Down
Larval carcass	14 ± 2	1 of 4	0.22	Down
S2 cells (growing)	5 ± 1	0 of 4	0.08	Down
Whole fly	63 ± 3	4 of 4

Looking for FBgn0040291. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720