FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0040298 through 18771 annotations produced 2 hits

Myt1 (Myt1):

Annotation Number : CG32417
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040298
Gbrowse : chr3L:5770571-5772687 (-) // 100.0 //
Probeset : 1632292_at
Accessions : protein= NP_647987;, nucleotide= NM_139730;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005737 // cytoplasm // non-traceable author statem
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0040298.
Homophila reports that CG32417 is a close match (7e-11) to human gene DM;DMK;DMPK (NP_001075032), a gene associated with Myotonic dystrophy, 160900 (3).
BioGrid reports that CG32417 interacts with CG3619 CG1395 CG5363 CG33336 .
TRiP has 1 RNAi stocks for FBgn0040298 available for purchase.
VDRC has 2 RNAi stocks for FBgn0040298 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	78 ± 4	4 of 4	0.90	None
Head	44 ± 2	4 of 4	0.50	Down
Eye	67 ± 3	4 of 4	0.75	Down
Thoracicoabdominal ganglion	89 ± 2	4 of 4	1.00	None
Salivary gland	65 ± 8	4 of 4	0.73	None
Crop	61 ± 1	4 of 4	0.70	Down
Midgut	42 ± 4	4 of 4	0.50	Down
Tubule	31 ± 2	4 of 4	0.40	Down
Hindgut	43 ± 3	4 of 4	0.50	Down
Heart	51 ± 2	4 of 4	0.58	Down
Fat body	41 ± 7	4 of 4	0.47	Down
Ovary	253 ± 15	4 of 4	2.80	Up
Testis	40 ± 1	4 of 4	0.50	Down
Male accessory glands	54 ± 2	4 of 4	0.60	Down
Virgin spermatheca	49 ± 2	4 of 4	0.56	Down
Mated spermatheca	51 ± 3	4 of 4	0.58	Down
Adult carcass	47 ± 3	4 of 4	0.50	Down
Larval CNS	74 ± 4	4 of 4	0.83	Down
Larval Salivary gland	51 ± 2	4 of 4	0.58	Down
Larval midgut	38 ± 2	4 of 4	0.43	Down
Larval tubule	36 ± 3	4 of 4	0.40	Down
Larval hindgut	48 ± 2	4 of 4	0.54	Down
Larval fat body	55 ± 2	4 of 4	0.60	Down
Larval trachea	83 ± 16	4 of 4	0.93	None
Larval carcass	48 ± 3	4 of 4	0.54	Down
S2 cells (growing)	55 ± 1	4 of 4	0.62	Down
Whole fly	89 ± 3	4 of 4

/// Myt1 (CG32418 /// Myt1):

Annotation Number : CG32418
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052418
Gbrowse : chr3L:5769416-5770389 (-) // 100.0 //
Probeset : 1629841_at
Accessions : protein= NP_729096;, nucleotide= NM_168136;
Pathway : 0005737 // cytoplasm // non-traceable author statement /// 0005794 // Golgi apparatus // inferred from direct assay ///
Interpro : 0004672 // protein kinase activity // inferred from sequence similarity /// 0004672 // protein kinase activity // non-tr
FlyMine data for FBgn0052418.
BDGP gene expression has embryonic in situ data for CG32418: 4 pix of staining in 1 body parts.
BioGrid reports that CG32418 interacts with CG9891 .
VDRC has 3 RNAi stocks for FBgn0052418 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	54 ± 4	4 of 4	0.60	Down
Head	64 ± 2	3 of 4	0.70	Down
Eye	56 ± 0	4 of 4	0.59	Down
Thoracicoabdominal ganglion	49 ± 4	3 of 4	0.50	Down
Salivary gland	52 ± 6	0 of 4	0.54	Down
Crop	50 ± 5	2 of 4	0.50	Down
Midgut	39 ± 4	0 of 4	0.40	Down
Tubule	51 ± 6	3 of 4	0.50	Down
Hindgut	31 ± 2	0 of 4	0.30	Down
Heart	53 ± 3	4 of 4	0.56	Down
Fat body	84 ± 7	4 of 4	0.88	None
Ovary	192 ± 3	4 of 4	2.00	Up
Testis	16 ± 0	1 of 4	0.20	Down
Male accessory glands	127 ± 6	4 of 4	1.30	Up
Virgin spermatheca	75 ± 2	4 of 4	0.79	Down
Mated spermatheca	117 ± 5	4 of 4	1.22	Up
Adult carcass	46 ± 5	0 of 4	0.50	Down
Larval CNS	118 ± 3	4 of 4	1.24	Up
Larval Salivary gland	63 ± 1	0 of 4	0.66	Down
Larval midgut	32 ± 3	0 of 4	0.34	Down
Larval tubule	24 ± 2	1 of 4	0.30	Down
Larval hindgut	44 ± 3	2 of 4	0.46	Down
Larval fat body	27 ± 3	0 of 4	0.30	Down
Larval trachea	91 ± 8	4 of 4	0.95	None
Larval carcass	55 ± 12	2 of 4	0.58	Down
S2 cells (growing)	62 ± 2	0 of 4	0.65	Down
Whole fly	95 ± 3	4 of 4

Looking for FBgn0040298. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720