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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0040323 through 18771 annotations produced 1 hits



osiris (GNBP1):

Annotation Number : CG6895
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040323
Gbrowse : chr3L:18668912-18670983 (+) // 100.0 //
Probeset : 1624124_at
Accessions : protein= NP_524142;, nucleotide= NM_079418;
Pathway : 0005576 // extracellular region // inferred from direct assay /// 0005624 // membrane fraction // inferred from direct a
Interpro : "0001530 // lipopolysaccharide binding // traceable author statement /// 0004553 // hydrolase activity
FlyMine data for FBgn0040323.
VDRC has 2 RNAi stocks for FBgn0040323 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain38 44 of 4 1.00None
Head114 74 of 4 3.00Up
Eye170 84 of 4 4.43Up
Thoracicoabdominal ganglion69 34 of 4 1.80Up
Salivary gland48 44 of 4 1.26None
Crop367 184 of 4 9.60Up
Midgut7 10 of 4 0.20Down
Tubule36 34 of 4 0.90None
Hindgut293 44 of 4 7.60Up
Heart70 34 of 4 1.83Up
Fat body124 94 of 4 3.24Up
Ovary19 14 of 4 0.50Down
Testis12 04 of 4 0.30Down
Male accessory glands32 44 of 4 0.80None
Virgin spermatheca182 64 of 4 4.76Up
Mated spermatheca156 54 of 4 4.06Up
Adult carcass110 54 of 4 2.90Up
Larval CNS41 54 of 4 1.09None
Larval Salivary gland11 22 of 4 0.30Down
Larval midgut15 02 of 4 0.41Down
Larval tubule6 10 of 4 0.20Down
Larval hindgut65 44 of 4 1.70Up
Larval fat body113 54 of 4 2.90Up
Larval trachea170 234 of 4 4.43Up
Larval carcass72 54 of 4 1.88Up
S2 cells (growing)253 74 of 4 6.59Up
Whole fly38 14 of 4

Looking for FBgn0040323. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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