FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0040344 through 18771 annotations produced 1 hits

(CG3711):

Annotation Number : CG3711
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040344
Gbrowse : chrX:817199-821596 (-) // 100.0 //
Probeset : 1623320_at
Accessions : protein= NP_001033819; /// NP_569869;, nucleotide= NM_001038730; /// NM_130513;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity
Interpro : 0003700 // sequence-specific DNA binding transcription factor activity // inferred from sequence or structural similarit
FlyMine data for FBgn0040344.
TRiP has 1 RNAi stocks for FBgn0040344 available for purchase.
VDRC has 4 RNAi stocks for FBgn0040344 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	432 ± 8	4 of 4	5.20	Up
Head	165 ± 10	4 of 4	2.00	Up
Eye	113 ± 7	4 of 4	1.38	Up
Thoracicoabdominal ganglion	417 ± 27	4 of 4	5.10	Up
Salivary gland	214 ± 6	4 of 4	2.60	Up
Crop	100 ± 4	4 of 4	1.20	None
Midgut	51 ± 5	4 of 4	0.60	Down
Tubule	40 ± 2	4 of 4	0.50	Down
Hindgut	66 ± 3	4 of 4	0.80	None
Heart	44 ± 5	4 of 4	0.54	Down
Fat body	39 ± 2	4 of 4	0.47	Down
Ovary	159 ± 2	4 of 4	1.90	Up
Testis	35 ± 3	4 of 4	0.40	Down
Male accessory glands	129 ± 6	4 of 4	1.60	Up
Virgin spermatheca	56 ± 2	4 of 4	0.68	Down
Mated spermatheca	61 ± 3	4 of 4	0.74	Down
Adult carcass	55 ± 3	4 of 4	0.70	Down
Larval CNS	176 ± 13	4 of 4	2.13	Up
Larval Salivary gland	160 ± 8	4 of 4	1.95	Up
Larval midgut	48 ± 3	4 of 4	0.59	Down
Larval tubule	53 ± 2	4 of 4	0.60	Down
Larval hindgut	79 ± 4	4 of 4	0.96	None
Larval fat body	53 ± 6	4 of 4	0.60	Down
Larval trachea	127 ± 3	4 of 4	1.55	Up
Larval carcass	67 ± 3	4 of 4	0.82	None
S2 cells (growing)	111 ± 1	4 of 4	1.35	Up
Whole fly	82 ± 5	4 of 4

Looking for FBgn0040344. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720