Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
About & FAQ
Top 50
Original data
Interesting meta-analysis

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0040361 through 18771 annotations produced 1 hits


Annotation Number : CG14627
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040361
Gbrowse : chrX:1076134-1076947 (+) // 100.0 //
Probeset : 1628640_at
Accessions : protein= NP_569889;, nucleotide= NM_130533;
FlyMine data for FBgn0040361.
BioGrid reports that CG14627 interacts with CG3891 CG8198 CG9036 .
VDRC has 1 RNAi stocks for FBgn0040361 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 00 of 4 0.50None
Head2 00 of 4 1.10None
Eye4 11 of 4 2.53None
Thoracicoabdominal ganglion1 00 of 4 0.90None
Salivary gland2 00 of 4 1.31None
Crop4 10 of 4 2.10None
Midgut3 00 of 4 1.60None
Tubule2 00 of 4 1.40None
Hindgut2 00 of 4 1.30None
Heart3 00 of 4 1.76None
Fat body1 00 of 4 0.76None
Ovary1 00 of 4 1.00None
Testis12 04 of 4 6.50Up
Male accessory glands1 00 of 4 0.80None
Virgin spermatheca5 11 of 4 2.76None
Mated spermatheca2 10 of 4 1.46None
Adult carcass2 00 of 4 1.10None
Larval CNS2 11 of 4 1.27None
Larval Salivary gland3 10 of 4 2.11None
Larval midgut1 00 of 4 0.73None
Larval tubule4 00 of 4 2.60Up
Larval hindgut1 00 of 4 0.95None
Larval fat body5 00 of 4 2.70Up
Larval trachea0 00 of 4 0.49None
Larval carcass1 00 of 4 0.62None
S2 cells (growing)1 00 of 4 0.84None
Whole fly1 00 of 4

Looking for FBgn0040361. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime