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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0040363 through 18771 annotations produced 1 hits



(CG11384):

Annotation Number : CG11384
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040363
Gbrowse : chrX:1067907-1070055 (-) // 100.0 //
Probeset : 1641290_at
Accessions : protein= NP_569887;, nucleotide= NM_130531;
FlyMine data for FBgn0040363.
BDGP gene expression has embryonic in situ data for EG:BACR42I17.3: 8 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0040363 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 0.40None
Head2 ± 00 of 4 0.30Down
Eye4 ± 12 of 4 0.42Down
Thoracicoabdominal ganglion3 ± 20 of 4 0.40None
Salivary gland12 ± 30 of 4 1.34None
Crop4 ± 10 of 4 0.50Down
Midgut29 ± 14 of 4 3.10Up
Tubule4 ± 00 of 4 0.50Down
Hindgut6 ± 00 of 4 0.70Down
Heart2 ± 10 of 4 0.31Down
Fat body5 ± 20 of 4 0.53Down
Ovary6 ± 11 of 4 0.60None
Testis6 ± 13 of 4 0.70None
Male accessory glands8 ± 20 of 4 0.80None
Virgin spermatheca3 ± 10 of 4 0.38Down
Mated spermatheca2 ± 10 of 4 0.23Down
Adult carcass5 ± 10 of 4 0.60None
Larval CNS4 ± 10 of 4 0.50Down
Larval Salivary gland14 ± 22 of 4 1.46None
Larval midgut101 ± 194 of 410.62Up
Larval tubule5 ± 11 of 4 0.60None
Larval hindgut22 ± 54 of 4 2.40None
Larval fat body6 ± 10 of 4 0.70None
Larval trachea7 ± 11 of 4 0.75None
Larval carcass11 ± 13 of 4 1.17None
S2 cells (growing)7 ± 22 of 4 0.81None
Whole fly9 ± 02 of 4

Looking for FBgn0040363. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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