FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0040394 through 18771 annotations produced 1 hits

(CG16903):

Annotation Number : CG16903
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040394
Gbrowse : chrX:1972375-1974416 (-) // 99.74 //
Probeset : 1633560_at
Accessions : protein= NP_569980;, nucleotide= NM_130624;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity
Interpro : 0016251 // general RNA polymerase II transcription factor activity // inferred from sequence or structural similarity //
FlyMine data for FBgn0040394.
BDGP gene expression has embryonic in situ data for EG:67A9.2: 20 pix of staining in 2 body parts.
Homophila reports that CG16903 is a close match (2e-15) to human gene FAM58A;STAR (NP_689487), a gene associated with STAR syndrome, 300707 (3).
BioGrid reports that CG16903 interacts with CG18584 .
VDRC has 2 RNAi stocks for FBgn0040394 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	154 ± 4	4 of 4	1.00	None
Head	128 ± 2	4 of 4	0.90	Down
Eye	89 ± 1	4 of 4	0.60	Down
Thoracicoabdominal ganglion	183 ± 6	4 of 4	1.20	Up
Salivary gland	189 ± 9	4 of 4	1.27	Up
Crop	198 ± 8	4 of 4	1.30	Up
Midgut	98 ± 5	4 of 4	0.70	Down
Tubule	163 ± 3	4 of 4	1.10	Up
Hindgut	134 ± 4	4 of 4	0.90	None
Heart	97 ± 3	4 of 4	0.66	Down
Fat body	128 ± 4	4 of 4	0.86	Down
Ovary	263 ± 4	4 of 4	1.80	Up
Testis	84 ± 5	4 of 4	0.60	Down
Male accessory glands	198 ± 11	4 of 4	1.30	Up
Virgin spermatheca	131 ± 8	4 of 4	0.88	None
Mated spermatheca	144 ± 9	4 of 4	0.97	None
Adult carcass	132 ± 2	4 of 4	0.90	Down
Larval CNS	266 ± 21	4 of 4	1.79	Up
Larval Salivary gland	210 ± 10	4 of 4	1.41	Up
Larval midgut	98 ± 5	4 of 4	0.66	Down
Larval tubule	150 ± 4	4 of 4	1.00	None
Larval hindgut	145 ± 6	4 of 4	0.98	None
Larval fat body	102 ± 4	4 of 4	0.70	Down
Larval trachea	240 ± 21	4 of 4	1.61	Up
Larval carcass	160 ± 4	4 of 4	1.08	None
S2 cells (growing)	370 ± 11	4 of 4	2.49	Up
Whole fly	148 ± 5	4 of 4

Looking for FBgn0040394. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720