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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0040466 through 18771 annotations produced 1 hits



dorsal interacting protein 2 (Dip2):

Annotation Number : CG9771
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040466
Gbrowse : chr3R:470364-471316 (-) // 100.0 //
Probeset : 1635203_at
Accessions : protein= NP_524224;, nucleotide= NM_079500;
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0004190 // aspartic-type endopeptidase activi
FlyMine data for FBgn0040466.
TRiP has 1 RNAi stocks for FBgn0040466 available for purchase.
VDRC has 2 RNAi stocks for FBgn0040466 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain126 ± 34 of 4 1.20Up
Head94 ± 34 of 4 0.90None
Eye128 ± 44 of 4 1.24Up
Thoracicoabdominal ganglion112 ± 54 of 4 1.10None
Salivary gland114 ± 44 of 4 1.11None
Crop130 ± 54 of 4 1.30Up
Midgut57 ± 14 of 4 0.60Down
Tubule54 ± 24 of 4 0.50Down
Hindgut91 ± 44 of 4 0.90None
Heart71 ± 34 of 4 0.69Down
Fat body30 ± 44 of 4 0.29Down
Ovary236 ± 124 of 4 2.30Up
Testis35 ± 24 of 4 0.30Down
Male accessory glands38 ± 24 of 4 0.40Down
Virgin spermatheca20 ± 04 of 4 0.20Down
Mated spermatheca30 ± 24 of 4 0.29Down
Adult carcass72 ± 34 of 4 0.70Down
Larval CNS128 ± 124 of 4 1.24Up
Larval Salivary gland116 ± 14 of 4 1.12None
Larval midgut31 ± 04 of 4 0.30Down
Larval tubule59 ± 34 of 4 0.60Down
Larval hindgut78 ± 34 of 4 0.76Down
Larval fat body36 ± 24 of 4 0.40Down
Larval trachea130 ± 74 of 4 1.26Up
Larval carcass54 ± 24 of 4 0.53Down
S2 cells (growing)17 ± 24 of 4 0.17Down
Whole fly103 ± 74 of 4

Looking for FBgn0040466. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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