FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0040493 through 18771 annotations produced 1 hits

granny smith (granny-smith):

Annotation Number : CG7340
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040493
Gbrowse : chr3R:8775763-8793434 (-) // 100.0 //
Probeset : 1636125_a_at
Accessions : protein= NP_650240; /// NP_731749; /// NP_731750;, nucleotide= NM_141983; /// NM_169482; /// NM_169483;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or st
Interpro : 0004177 // aminopeptidase activity // inferred from sequence or structural similarity /// 0004177 // aminopeptidase acti
FlyMine data for FBgn0040493.
BioGrid reports that CG7340 interacts with CG8229 .
VDRC has 2 RNAi stocks for FBgn0040493 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	154 ± 5	4 of 4	0.20	Down
Head	247 ± 6	4 of 4	0.40	Down
Eye	185 ± 1	4 of 4	0.29	Down
Thoracicoabdominal ganglion	164 ± 3	4 of 4	0.30	Down
Salivary gland	226 ± 13	4 of 4	0.35	Down
Crop	281 ± 5	4 of 4	0.40	Down
Midgut	488 ± 8	4 of 4	0.80	Down
Tubule	1000 ± 50	4 of 4	1.50	Up
Hindgut	239 ± 7	4 of 4	0.40	Down
Heart	974 ± 49	4 of 4	1.50	Up
Fat body	496 ± 56	4 of 4	0.76	Down
Ovary	758 ± 13	4 of 4	1.20	Up
Testis	1273 ± 30	4 of 4	2.00	Up
Male accessory glands	366 ± 15	4 of 4	0.60	Down
Virgin spermatheca	445 ± 12	4 of 4	0.68	Down
Mated spermatheca	403 ± 42	4 of 4	0.62	Down
Adult carcass	389 ± 8	4 of 4	0.60	Down
Larval CNS	446 ± 23	4 of 4	0.69	Down
Larval Salivary gland	1107 ± 51	4 of 4	1.70	Up
Larval midgut	789 ± 79	4 of 4	1.22	None
Larval tubule	3020 ± 64	4 of 4	4.60	Up
Larval hindgut	681 ± 45	4 of 4	1.05	None
Larval fat body	1540 ± 187	4 of 4	2.40	Up
Larval trachea	822 ± 70	4 of 4	1.27	Up
Larval carcass	1706 ± 164	4 of 4	2.63	Up
S2 cells (growing)	658 ± 9	4 of 4	1.01	None
Whole fly	649 ± 18	4 of 4

Looking for FBgn0040493. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720