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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0040502 through 18771 annotations produced 1 hits



Incilarin-like (CG8343):

Annotation Number : CG8343
Flybase ID : FBgn0040502
Gbrowse : chr2R:2067224-2067875 (+) // 100.0 //
Probeset : 1641071_at
Accessions : protein= NP_610207;, nucleotide= NM_136363;
Interpro : 0005488 // binding // inferred from electronic annotation /// 0005529 // sugar binding // inferred from electronic annot
FlyMine data for FBgn0040502.
VDRC has 1 RNAi stocks for FBgn0040502 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.00Down
Head4771 1754 of 4 5.00Up
Eye3 10 of 4 0.00Down
Thoracicoabdominal ganglion3 00 of 4 0.00Down
Salivary gland1 00 of 4 0.00Down
Crop1 00 of 4 0.00Down
Midgut0 00 of 4 0.00Down
Tubule1 00 of 4 0.00Down
Hindgut3 10 of 4 0.00Down
Heart10 31 of 4 0.01Down
Fat body8 40 of 4 0.01Down
Ovary0 00 of 4 0.00Down
Testis1 00 of 4 0.00Down
Male accessory glands1 00 of 4 0.00Down
Virgin spermatheca9 10 of 4 0.01Down
Mated spermatheca12 21 of 4 0.01Down
Adult carcass76 513 of 4 0.10Down
Larval CNS0 00 of 4 0.00Down
Larval Salivary gland2 10 of 4 0.00Down
Larval midgut2 00 of 4 0.00Down
Larval tubule3 10 of 4 0.00Down
Larval hindgut1 00 of 4 0.00Down
Larval fat body1 00 of 4 0.00Down
Larval trachea0 00 of 4 0.00Down
Larval carcass1 00 of 4 0.00Down
S2 cells (growing)0 00 of 4 0.00Down
Whole fly957 654 of 4

Looking for FBgn0040502. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime