Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0040532 through 18771 annotations produced 1 hits



(CG8369):

Annotation Number : CG8369
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040532
Gbrowse : chr3R:4647740-4648563 (+) // 100.0 //
Probeset : 1623342_at
Accessions : protein= NP_652187;, nucleotide= NM_143930;
FlyMine data for FBgn0040532.
VDRC has 1 RNAi stocks for FBgn0040532 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3619 ± 974 of 4 6.60Up
Head3635 ± 1614 of 4 6.60Up
Eye1501 ± 1234 of 4 2.73Up
Thoracicoabdominal ganglion3930 ± 1704 of 4 7.20Up
Salivary gland1895 ± 1364 of 4 3.45Up
Crop241 ± 114 of 4 0.40Down
Midgut49 ± 24 of 4 0.10Down
Tubule35 ± 52 of 4 0.10Down
Hindgut2182 ± 434 of 4 4.00Up
Heart698 ± 174 of 4 1.27Up
Fat body976 ± 1364 of 4 1.78Up
Ovary26 ± 24 of 4 0.00Down
Testis165 ± 84 of 4 0.30Down
Male accessory glands1118 ± 924 of 4 2.00Up
Virgin spermatheca2803 ± 624 of 4 5.10Up
Mated spermatheca2172 ± 214 of 4 3.95Up
Adult carcass1151 ± 304 of 4 2.10Up
Larval CNS1255 ± 1814 of 4 2.29Up
Larval Salivary gland624 ± 414 of 4 1.14None
Larval midgut37 ± 33 of 4 0.07Down
Larval tubule61 ± 153 of 4 0.10Down
Larval hindgut1782 ± 704 of 4 3.24Up
Larval fat body6604 ± 7494 of 412.00Up
Larval trachea2463 ± 2024 of 4 4.49Up
Larval carcass189 ± 144 of 4 0.34Down
S2 cells (growing)160 ± 114 of 4 0.29Down
Whole fly549 ± 214 of 4

Looking for FBgn0040532. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime