Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0040636 through 18771 annotations produced 1 hits



(CG13255):

Annotation Number : CG13255
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040636
Gbrowse : chr3L:20830999-20831929 (+) // 100.0 //
Probeset : 1635919_at
Accessions : protein= NP_652282;, nucleotide= NM_144025;
FlyMine data for FBgn0040636.
VDRC has 3 RNAi stocks for FBgn0040636 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain176 ± 74 of 4 1.20None
Head125 ± 104 of 4 0.90None
Eye57 ± 44 of 4 0.40Down
Thoracicoabdominal ganglion184 ± 84 of 4 1.30Up
Salivary gland118 ± 74 of 4 0.82None
Crop63 ± 24 of 4 0.40Down
Midgut538 ± 104 of 4 3.70Up
Tubule288 ± 74 of 4 2.00Up
Hindgut436 ± 164 of 4 3.00Up
Heart212 ± 184 of 4 1.48Up
Fat body246 ± 534 of 4 1.71Up
Ovary8 ± 13 of 4 0.10Down
Testis294 ± 14 of 4 2.00Up
Male accessory glands1852 ± 1404 of 412.90Up
Virgin spermatheca105 ± 64 of 4 0.73Down
Mated spermatheca50 ± 74 of 4 0.35Down
Adult carcass258 ± 154 of 4 1.80Up
Larval CNS41 ± 34 of 4 0.29Down
Larval Salivary gland111 ± 94 of 4 0.77None
Larval midgut526 ± 624 of 4 3.65Up
Larval tubule1768 ± 804 of 412.30Up
Larval hindgut376 ± 274 of 4 2.61Up
Larval fat body238 ± 234 of 4 1.70Up
Larval trachea180 ± 244 of 4 1.25None
Larval carcass214 ± 44 of 4 1.49Up
S2 cells (growing)10 ± 12 of 4 0.07Down
Whole fly144 ± 104 of 4

Looking for FBgn0040636. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime