Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0040784 through 18771 annotations produced 1 hits



/// (CG15323 /// DsimCG15323):

Annotation Number : CG15323
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040784
Gbrowse : chrX:20004215-20004509 (-) // 100.0 //
Probeset : 1632696_at
Accessions : protein= NP_652406;, nucleotide= NM_144149;
FlyMine data for FBgn0040784.
VDRC has 3 RNAi stocks for FBgn0040784 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 0.10Down
Head2 ± 00 of 4 0.10Down
Eye1 ± 00 of 4 0.07Down
Thoracicoabdominal ganglion1 ± 00 of 4 0.10Down
Salivary gland4 ± 00 of 4 0.22Down
Crop1 ± 10 of 4 0.10Down
Midgut4 ± 20 of 4 0.20Down
Tubule1 ± 00 of 4 0.10Down
Hindgut1 ± 00 of 4 0.10Down
Heart0 ± 00 of 4 0.03Down
Fat body2 ± 10 of 4 0.14Down
Ovary1 ± 00 of 4 0.10Down
Testis281 ± 194 of 414.80Up
Male accessory glands2 ± 10 of 4 0.10Down
Virgin spermatheca3 ± 10 of 4 0.18Down
Mated spermatheca3 ± 10 of 4 0.18Down
Adult carcass4 ± 10 of 4 0.20Down
Larval CNS0 ± 00 of 4 0.04Down
Larval Salivary gland1 ± 00 of 4 0.07Down
Larval midgut4 ± 10 of 4 0.25Down
Larval tubule0 ± 00 of 4 0.00Down
Larval hindgut1 ± 00 of 4 0.09Down
Larval fat body41 ± 163 of 4 2.20None
Larval trachea0 ± 00 of 4 0.02Down
Larval carcass2 ± 00 of 4 0.11Down
S2 cells (growing)10 ± 01 of 4 0.58Down
Whole fly19 ± 11 of 4

Looking for FBgn0040784. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime