FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0040923 through 18771 annotations produced 1 hits

(CG11368):

Annotation Number : CG11368
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040923
Gbrowse : chrX:7346240-7346696 (+) // 100.0 //
Probeset : 1629474_at
Accessions : protein= NP_652531;, nucleotide= NM_144274;
FlyMine data for FBgn0040923.
VDRC has 1 RNAi stocks for FBgn0040923 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	76 ± 13	4 of 4	0.30	Down
Head	2073 ± 215	4 of 4	8.50	Up
Eye	8 ± 2	0 of 4	0.03	Down
Thoracicoabdominal ganglion	36 ± 3	4 of 4	0.10	Down
Salivary gland	14 ± 6	0 of 4	0.06	Down
Crop	7 ± 1	0 of 4	0.00	Down
Midgut	13 ± 1	1 of 4	0.10	Down
Tubule	4 ± 0	0 of 4	0.00	Down
Hindgut	7 ± 1	0 of 4	0.00	Down
Heart	2 ± 0	0 of 4	0.01	Down
Fat body	3 ± 2	0 of 4	0.02	Down
Ovary	2 ± 0	0 of 4	0.00	Down
Testis	4 ± 1	0 of 4	0.00	Down
Male accessory glands	13 ± 4	0 of 4	0.10	Down
Virgin spermatheca	2 ± 0	0 of 4	0.01	Down
Mated spermatheca	4 ± 0	0 of 4	0.02	Down
Adult carcass	392 ± 24	4 of 4	1.60	Up
Larval CNS	4 ± 2	0 of 4	0.02	Down
Larval Salivary gland	7 ± 2	0 of 4	0.03	Down
Larval midgut	11 ± 1	3 of 4	0.04	Down
Larval tubule	6 ± 1	0 of 4	0.00	Down
Larval hindgut	6 ± 1	0 of 4	0.03	Down
Larval fat body	4 ± 1	0 of 4	0.00	Down
Larval trachea	1 ± 1	0 of 4	0.01	Down
Larval carcass	20 ± 6	0 of 4	0.08	Down
S2 cells (growing)	4 ± 1	0 of 4	0.02	Down
Whole fly	244 ± 31	4 of 4

Looking for FBgn0040923. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720