Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0040992 through 18771 annotations produced 1 hits



/// (CG10570 /// CG42502):

Annotation Number : CG10570
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040992 /// FBgn0260228
Gbrowse : chr2L:18810035-18810986 (-) // 100.0 //
Probeset : 1636268_at
Accessions : protein= NP_001163011; /// NP_652585;, nucleotide= NM_001169540; /// NM_144328;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0040992 /// FBgn0260228.
BioGrid reports that CG10570 interacts with CG1461 CG9578 CG9665 CG33528 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain88 24 of 4 0.00Down
Head3915 1414 of 4 1.80Up
Eye3771 1064 of 4 1.77Up
Thoracicoabdominal ganglion113 434 of 4 0.10Down
Salivary gland56 213 of 4 0.03Down
Crop505 824 of 4 0.20Down
Midgut1 00 of 4 0.00Down
Tubule8 50 of 4 0.00Down
Hindgut40 54 of 4 0.00Down
Heart882 824 of 4 0.41Down
Fat body439 1574 of 4 0.21Down
Ovary34 34 of 4 0.00Down
Testis362 14 of 4 0.20Down
Male accessory glands4085 1094 of 4 1.90Up
Virgin spermatheca16 14 of 4 0.01Down
Mated spermatheca22 54 of 4 0.01Down
Adult carcass5277 2514 of 4 2.50Up
Larval CNS183 444 of 4 0.09Down
Larval Salivary gland5 22 of 4 0.00Down
Larval midgut15 52 of 4 0.01Down
Larval tubule10 02 of 4 0.00Down
Larval hindgut371 724 of 4 0.17Down
Larval fat body5 21 of 4 0.00Down
Larval trachea972 4004 of 4 0.46Down
Larval carcass4212 3684 of 4 1.97Up
S2 cells (growing)25 24 of 4 0.01Down
Whole fly2133 744 of 4

Looking for FBgn0040992. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime