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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0041087 through 18771 annotations produced 1 hits



wunen2 (wun2):

Annotation Number : CG8805
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0041087
Gbrowse : chr2R:5301848-5305353 (+) // 100.0 //
Probeset : 1641598_at
Accessions : protein= NP_524991;, nucleotide= NM_080252;
Pathway : 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or str
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0005319 // lipid transporter activity // inferr
FlyMine data for FBgn0041087.
TRiP has 2 RNAi stocks for FBgn0041087 available for purchase.
VDRC has 3 RNAi stocks for FBgn0041087 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain341 ± 44 of 4 1.90Up
Head120 ± 54 of 4 0.70Down
Eye25 ± 34 of 4 0.15Down
Thoracicoabdominal ganglion403 ± 184 of 4 2.30Up
Salivary gland11 ± 22 of 4 0.07Down
Crop13 ± 23 of 4 0.10Down
Midgut56 ± 34 of 4 0.30Down
Tubule23 ± 34 of 4 0.10Down
Hindgut21 ± 14 of 4 0.10Down
Heart56 ± 74 of 4 0.32Down
Fat body14 ± 32 of 4 0.08Down
Ovary428 ± 114 of 4 2.40Up
Testis25 ± 34 of 4 0.10Down
Male accessory glands46 ± 84 of 4 0.30Down
Virgin spermatheca57 ± 34 of 4 0.33Down
Mated spermatheca80 ± 94 of 4 0.46Down
Adult carcass19 ± 31 of 4 0.10Down
Larval CNS196 ± 244 of 4 1.12None
Larval Salivary gland15 ± 22 of 4 0.09Down
Larval midgut81 ± 84 of 4 0.47Down
Larval tubule9 ± 22 of 4 0.10Down
Larval hindgut36 ± 14 of 4 0.21Down
Larval fat body12 ± 00 of 4 0.10Down
Larval trachea18 ± 14 of 4 0.11Down
Larval carcass129 ± 44 of 4 0.74Down
S2 cells (growing)58 ± 34 of 4 0.33Down
Whole fly176 ± 74 of 4

Looking for FBgn0041087. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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