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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0041103 through 18771 annotations produced 1 hits



nohitter (nht):

Annotation Number : CG15259
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0041103
Gbrowse : chr2L:15318108-15319906 (-) // 100.0 //
Probeset : 1631270_at
Accessions : protein= NP_523574;, nucleotide= NM_078850;
Pathway : 0005669 // transcription factor TFIID complex // inferred from sequence or structural similarity /// 0005669 // transcri
Interpro : 0016251 // general RNA polymerase II transcription factor activity // inferred from sequence or structural similarity //
FlyMine data for FBgn0041103.
VDRC has 2 RNAi stocks for FBgn0041103 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.10Down
Head0 ± 00 of 4 0.10Down
Eye0 ± 00 of 4 0.08Down
Thoracicoabdominal ganglion2 ± 00 of 4 0.20Down
Salivary gland6 ± 20 of 4 0.74None
Crop1 ± 00 of 4 0.20Down
Midgut1 ± 00 of 4 0.10Down
Tubule1 ± 00 of 4 0.20Down
Hindgut3 ± 20 of 4 0.40None
Heart1 ± 00 of 4 0.17Down
Fat body3 ± 40 of 4 0.35None
Ovary0 ± 00 of 4 0.10Down
Testis142 ± 44 of 416.10Up
Male accessory glands2 ± 00 of 4 0.30Down
Virgin spermatheca0 ± 00 of 4 0.09Down
Mated spermatheca1 ± 00 of 4 0.12Down
Adult carcass1 ± 00 of 4 0.20Down
Larval CNS0 ± 00 of 4 0.10Down
Larval Salivary gland2 ± 10 of 4 0.24Down
Larval midgut3 ± 10 of 4 0.35Down
Larval tubule1 ± 00 of 4 0.20Down
Larval hindgut1 ± 00 of 4 0.12Down
Larval fat body30 ± 103 of 4 3.50None
Larval trachea0 ± 00 of 4 0.10Down
Larval carcass1 ± 00 of 4 0.13Down
S2 cells (growing)1 ± 00 of 4 0.17Down
Whole fly8 ± 01 of 4

Looking for FBgn0041103. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime