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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0041147 through 18771 annotations produced 1 hits



imaginal discs arrested (ida):

Annotation Number : CG10850
Flybase ID : FBgn0041147
Gbrowse : chr3L:3905352-3907813 (+) // 100.0 //
Probeset : 1641316_at
Accessions : protein= NP_647837; /// NP_995995;, nucleotide= NM_139580; /// NM_206273;
Pathway : 0005680 // anaphase-promoting complex // non-traceable author statement /// 0005680 // anaphase-promoting complex // tra
Interpro : 0005488 // binding // inferred from electronic annotation
FlyMine data for FBgn0041147.
TRiP has 1 RNAi stocks for FBgn0041147 available for purchase.
VDRC has 3 RNAi stocks for FBgn0041147 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain26 14 of 4 0.50Down
Head15 21 of 4 0.30Down
Eye18 12 of 4 0.33Down
Thoracicoabdominal ganglion34 14 of 4 0.60Down
Salivary gland24 42 of 4 0.44Down
Crop58 24 of 4 1.10None
Midgut22 01 of 4 0.40Down
Tubule28 14 of 4 0.50Down
Hindgut23 13 of 4 0.40Down
Heart18 14 of 4 0.33Down
Fat body12 30 of 4 0.23Down
Ovary121 24 of 4 2.20Up
Testis63 44 of 4 1.20None
Male accessory glands22 32 of 4 0.40Down
Virgin spermatheca17 20 of 4 0.32Down
Mated spermatheca21 41 of 4 0.39Down
Adult carcass8 21 of 4 0.20Down
Larval CNS93 84 of 4 1.68Up
Larval Salivary gland45 44 of 4 0.83None
Larval midgut25 12 of 4 0.45Down
Larval tubule25 14 of 4 0.50Down
Larval hindgut28 13 of 4 0.52Down
Larval fat body25 22 of 4 0.50Down
Larval trachea38 64 of 4 0.69Down
Larval carcass27 24 of 4 0.49Down
S2 cells (growing)34 14 of 4 0.62Down
Whole fly55 34 of 4

Looking for FBgn0041147. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime