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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0041181 through 18771 annotations produced 1 hits



Thiolester containing protein III (TepIII):

Annotation Number : CG7068
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0041181
Gbrowse : chr2L:7702806-7710697 (+) // 100.0 //
Probeset : 1623753_at
Accessions : protein= NP_523507;, nucleotide= NM_078783;
Pathway : engulfment // inferred from mutant phenotype /// 0050830 // defense response to Gram-positive bacterium // inferred fro
Interpro : 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred fr
FlyMine data for FBgn0041181.
BDGP gene expression has embryonic in situ data for TepIII: 7 pix of staining in 1 body parts.
Homophila reports that CG7068 is a close match (5e-30) to human gene C5 (NP_001726), a gene associated with C5 deficiency (1).
VDRC has 3 RNAi stocks for FBgn0041181 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain26 ± 14 of 4 0.70Down
Head107 ± 44 of 4 3.00Up
Eye105 ± 24 of 4 2.95Up
Thoracicoabdominal ganglion5 ± 10 of 4 0.10Down
Salivary gland61 ± 34 of 4 1.72Up
Crop314 ± 34 of 4 8.80Up
Midgut6 ± 11 of 4 0.20Down
Tubule7 ± 10 of 4 0.20Down
Hindgut193 ± 24 of 4 5.40Up
Heart14 ± 14 of 4 0.40Down
Fat body16 ± 42 of 4 0.45Down
Ovary1 ± 00 of 4 0.00Down
Testis32 ± 14 of 4 0.90None
Male accessory glands5 ± 30 of 4 0.10Down
Virgin spermatheca67 ± 74 of 4 1.88Up
Mated spermatheca114 ± 164 of 4 3.20Up
Adult carcass96 ± 74 of 4 2.70Up
Larval CNS6 ± 02 of 4 0.19Down
Larval Salivary gland31 ± 34 of 4 0.87None
Larval midgut15 ± 13 of 4 0.43Down
Larval tubule3 ± 20 of 4 0.10Down
Larval hindgut263 ± 74 of 4 7.32Up
Larval fat body4 ± 20 of 4 0.10Down
Larval trachea618 ± 514 of 417.22Up
Larval carcass562 ± 404 of 415.68Up
S2 cells (growing)0 ± 00 of 4 0.02Down
Whole fly35 ± 24 of 4

Looking for FBgn0041181. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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