FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0041186 through 18771 annotations produced 1 hits

Stem-loop binding protein (Slbp):

Annotation Number : CG11886
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0041186
Gbrowse : chr3R:24977792-24978969 (-) // 100.0 //
Probeset : 1629406_at
Accessions : protein= NP_477480;, nucleotide= NM_058132;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay
Interpro : 0003723 // RNA binding // inferred from direct assay /// 0003723 // RNA binding // inferred from electronic annotation /
FlyMine data for FBgn0041186.
BDGP gene expression has embryonic in situ data for Slbp: 22 pix of staining in 15 body parts.
VDRC has 4 RNAi stocks for FBgn0041186 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	132 ± 3	4 of 4	0.40	Down
Head	79 ± 6	4 of 4	0.20	Down
Eye	77 ± 2	4 of 4	0.24	Down
Thoracicoabdominal ganglion	107 ± 4	4 of 4	0.30	Down
Salivary gland	94 ± 10	4 of 4	0.29	Down
Crop	105 ± 1	4 of 4	0.30	Down
Midgut	51 ± 4	4 of 4	0.20	Down
Tubule	30 ± 4	4 of 4	0.10	Down
Hindgut	57 ± 5	4 of 4	0.20	Down
Heart	66 ± 5	4 of 4	0.21	Down
Fat body	82 ± 15	4 of 4	0.26	Down
Ovary	655 ± 6	4 of 4	2.00	Up
Testis	215 ± 9	4 of 4	0.70	Down
Male accessory glands	71 ± 9	4 of 4	0.20	Down
Virgin spermatheca	37 ± 5	4 of 4	0.11	Down
Mated spermatheca	43 ± 7	4 of 4	0.14	Down
Adult carcass	84 ± 4	4 of 4	0.30	Down
Larval CNS	304 ± 4	4 of 4	0.94	None
Larval Salivary gland	149 ± 9	4 of 4	0.46	Down
Larval midgut	42 ± 4	4 of 4	0.13	Down
Larval tubule	39 ± 2	4 of 4	0.10	Down
Larval hindgut	65 ± 1	4 of 4	0.20	Down
Larval fat body	57 ± 7	4 of 4	0.20	Down
Larval trachea	147 ± 12	4 of 4	0.46	Down
Larval carcass	94 ± 2	4 of 4	0.29	Down
S2 cells (growing)	310 ± 12	4 of 4	0.96	None
Whole fly	322 ± 28	4 of 4

Looking for FBgn0041186. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720