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FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0041225 through 18771 annotations produced 1 hits



Gustatory receptor 94a (Gr94a):

Annotation Number : CG31280
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0041225
Gbrowse : chr3R:18877410-18878625 (+) // 100.0 //
Probeset : 1629298_at
Accessions : protein= NP_732816;, nucleotide= NM_170046;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0041225.
VDRC has 3 RNAi stocks for FBgn0041225 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 1.00None
Head0 ± 00 of 4 0.40None
Eye0 ± 00 of 4 0.44None
Thoracicoabdominal ganglion2 ± 00 of 4 1.40None
Salivary gland8 ± 20 of 4 4.72None
Crop3 ± 10 of 4 1.70None
Midgut2 ± 00 of 4 1.20None
Tubule4 ± 10 of 4 2.10Up
Hindgut1 ± 00 of 4 0.70None
Heart1 ± 00 of 4 0.73None
Fat body2 ± 10 of 4 1.28None
Ovary0 ± 00 of 4 0.40None
Testis3 ± 00 of 4 1.70None
Male accessory glands8 ± 10 of 4 4.70Up
Virgin spermatheca4 ± 10 of 4 2.40None
Mated spermatheca3 ± 10 of 4 1.89None
Adult carcass4 ± 20 of 4 2.60None
Larval CNS2 ± 20 of 4 1.21None
Larval Salivary gland4 ± 10 of 4 2.37None
Larval midgut2 ± 10 of 4 1.27None
Larval tubule4 ± 20 of 4 2.20None
Larval hindgut2 ± 00 of 4 1.27None
Larval fat body2 ± 00 of 4 1.20None
Larval trachea3 ± 10 of 4 1.69None
Larval carcass2 ± 10 of 4 1.37None
S2 cells (growing)27 ± 14 of 414.85Up
Whole fly1 ± 00 of 4

Looking for FBgn0041225. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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