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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0041234 through 18771 annotations produced 1 hits



Gustatory receptor 59f (Gr59f):

Annotation Number : CG33150
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0041234
Gbrowse : chr2R:19430032-19431408 (+) // 100.0 //
Probeset : 1627353_at
Accessions : protein= NP_788432;, nucleotide= NM_176252;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0041234.
VDRC has 3 RNAi stocks for FBgn0041234 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 00 of 4 0.70None
Head2 10 of 4 2.20None
Eye3 20 of 4 2.86None
Thoracicoabdominal ganglion2 00 of 4 2.20None
Salivary gland4 20 of 4 3.30None
Crop3 10 of 4 3.10None
Midgut7 20 of 4 6.10None
Tubule32 14 of 426.00Up
Hindgut3 10 of 4 2.40None
Heart2 00 of 4 1.96None
Fat body1 10 of 4 1.26None
Ovary0 00 of 4 0.40None
Testis7 12 of 4 5.60Up
Male accessory glands4 20 of 4 3.70None
Virgin spermatheca2 00 of 4 2.26None
Mated spermatheca1 00 of 4 1.22None
Adult carcass2 00 of 4 1.70None
Larval CNS1 10 of 4 1.58None
Larval Salivary gland2 10 of 4 1.86None
Larval midgut1 00 of 4 1.52None
Larval tubule31 54 of 425.00Up
Larval hindgut0 00 of 4 0.60None
Larval fat body7 30 of 4 6.00None
Larval trachea1 10 of 4 1.46None
Larval carcass3 00 of 4 2.54None
S2 cells (growing)3 00 of 4 2.52None
Whole fly1 00 of 4

Looking for FBgn0041234. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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