Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0041239 through 18771 annotations produced 1 hits



Gustatory receptor 58A.1 (Gr58a):

Annotation Number : CG30396
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0041239
Gbrowse : chr2R:17867457-17868601 (+) // 100.0 //
Probeset : 1639120_at
Accessions : protein= NP_726135;, nucleotide= NM_166491;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0041239.
VDRC has 4 RNAi stocks for FBgn0041239 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 01 of 4 1.20None
Head2 ± 10 of 4 0.90None
Eye2 ± 10 of 4 0.85None
Thoracicoabdominal ganglion4 ± 11 of 4 1.50None
Salivary gland14 ± 50 of 4 5.26None
Crop6 ± 20 of 4 2.40None
Midgut2 ± 00 of 4 1.00None
Tubule7 ± 10 of 4 2.50Up
Hindgut7 ± 12 of 4 2.70Up
Heart1 ± 00 of 4 0.66None
Fat body6 ± 50 of 4 2.34None
Ovary1 ± 00 of 4 0.70None
Testis3 ± 02 of 4 1.10None
Male accessory glands9 ± 10 of 4 3.30Up
Virgin spermatheca6 ± 10 of 4 2.35None
Mated spermatheca1 ± 00 of 4 0.61None
Adult carcass1 ± 00 of 4 0.70None
Larval CNS6 ± 23 of 4 2.24None
Larval Salivary gland7 ± 10 of 4 2.67Up
Larval midgut6 ± 20 of 4 2.44None
Larval tubule5 ± 10 of 4 2.10None
Larval hindgut3 ± 11 of 4 1.30None
Larval fat body4 ± 10 of 4 1.60None
Larval trachea0 ± 00 of 4 0.12None
Larval carcass3 ± 10 of 4 1.36None
S2 cells (growing)3 ± 00 of 4 1.15None
Whole fly2 ± 10 of 4

Looking for FBgn0041239. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime