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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0041241 through 18771 annotations produced 1 hits



Gustatory receptor 47b (Gr47b):

Annotation Number : CG30030
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0041241
Gbrowse : chr2R:7249451-7250774 (+) // 100.0 //
Probeset : 1624952_at
Accessions : protein= NP_725040;, nucleotide= NM_165826;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0041241.
VDRC has 1 RNAi stocks for FBgn0041241 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 2.60None
Head0 ± 00 of 4 1.50None
Eye4 ± 10 of 4 8.76None
Thoracicoabdominal ganglion0 ± 00 of 4 1.10None
Salivary gland0 ± 00 of 4 1.76None
Crop1 ± 00 of 4 3.30None
Midgut1 ± 00 of 4 2.00None
Tubule2 ± 00 of 4 4.10Up
Hindgut0 ± 00 of 4 1.20None
Heart1 ± 00 of 4 3.76None
Fat body0 ± 00 of 4 1.76None
Ovary1 ± 10 of 4 3.70None
Testis1 ± 00 of 4 2.20None
Male accessory glands2 ± 00 of 4 4.70None
Virgin spermatheca1 ± 00 of 4 3.33Up
Mated spermatheca0 ± 00 of 4 1.14None
Adult carcass1 ± 00 of 4 2.20None
Larval CNS2 ± 20 of 4 4.43None
Larval Salivary gland1 ± 00 of 4 2.90None
Larval midgut0 ± 00 of 4 1.43None
Larval tubule1 ± 00 of 4 2.30None
Larval hindgut0 ± 00 of 4 0.76None
Larval fat body2 ± 10 of 4 4.50None
Larval trachea1 ± 00 of 4 2.29None
Larval carcass1 ± 00 of 4 2.81None
S2 cells (growing)1 ± 00 of 4 3.48None
Whole fly0 ± 00 of 4

Looking for FBgn0041241. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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