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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0041249 through 18771 annotations produced 1 hits



Gustatory receptor 22f (Gr22f):

Annotation Number : CG31932
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0041249
Gbrowse : chr2L:1755252-1756445 (-) // 100.0 //
Probeset : 1625222_at
Accessions : protein= NP_722729;, nucleotide= NM_164437;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0041249.
VDRC has 3 RNAi stocks for FBgn0041249 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 21 of 4 0.90None
Head6 ± 10 of 4 1.30None
Eye2 ± 00 of 4 0.42None
Thoracicoabdominal ganglion2 ± 10 of 4 0.60None
Salivary gland9 ± 40 of 4 1.93None
Crop3 ± 10 of 4 0.70None
Midgut5 ± 20 of 4 1.10None
Tubule4 ± 00 of 4 0.80None
Hindgut4 ± 10 of 4 0.80None
Heart0 ± 00 of 4 0.18None
Fat body3 ± 20 of 4 0.62None
Ovary1 ± 00 of 4 0.40None
Testis13 ± 04 of 4 2.60Up
Male accessory glands6 ± 00 of 4 1.40None
Virgin spermatheca1 ± 00 of 4 0.32None
Mated spermatheca1 ± 00 of 4 0.36None
Adult carcass7 ± 31 of 4 1.40None
Larval CNS2 ± 10 of 4 0.55None
Larval Salivary gland7 ± 32 of 4 1.52None
Larval midgut5 ± 10 of 4 1.03None
Larval tubule1 ± 00 of 4 0.30None
Larval hindgut3 ± 00 of 4 0.62None
Larval fat body4 ± 10 of 4 1.00None
Larval trachea2 ± 10 of 4 0.48None
Larval carcass3 ± 10 of 4 0.70None
S2 cells (growing)2 ± 00 of 4 0.54None
Whole fly5 ± 10 of 4

Looking for FBgn0041249. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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