FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0041585 through 18771 annotations produced 2 hits

lethal (2) k11505 (olf186-F):

Annotation Number : CG11430
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0041585
Gbrowse : chr2R:13730949-13748075 (+) // 100.0 //
Probeset : 1625514_s_at
Accessions : protein= NP_001137696; /// NP_611273; /// NP_725727; /// NP_725728; /// NP_995881;, nucleotide= NM_001144224; /// NM_137429; /// NM_170626; /// NM_170627; /// NM_206159;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-trac
Interpro : 0004252 // serine-type endopeptidase activity // non-traceable author statement /// 0005216 // ion channel activity // i
FlyMine data for FBgn0041585.
BDGP gene expression has embryonic in situ data for olf186-F: 4 pix of staining in 1 body parts.
Homophila reports that CG11430 is a close match (3e-53) to human gene TMEM142A;CRACM1;ORAT1 (NP_116179), a gene associated with Severe combined immunodeficiency, autosomal recessive, with CRAC channel dysfunction (3).
BioGrid reports that CG11430 interacts with CG2851 .
VDRC has 2 RNAi stocks for FBgn0041585 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	185 ± 14	4 of 4	1.20	None
Head	240 ± 13	4 of 4	1.50	Up
Eye	235 ± 31	4 of 4	1.49	None
Thoracicoabdominal ganglion	204 ± 4	4 of 4	1.30	Up
Salivary gland	90 ± 8	4 of 4	0.57	Down
Crop	143 ± 2	4 of 4	0.90	None
Midgut	66 ± 3	4 of 4	0.40	Down
Tubule	633 ± 72	4 of 4	4.00	Up
Hindgut	212 ± 9	4 of 4	1.30	Up
Heart	104 ± 13	4 of 4	0.66	Down
Fat body	203 ± 29	4 of 4	1.28	None
Ovary	362 ± 25	4 of 4	2.30	Up
Testis	42 ± 3	4 of 4	0.30	Down
Male accessory glands	103 ± 5	4 of 4	0.70	Down
Virgin spermatheca	356 ± 27	4 of 4	2.25	Up
Mated spermatheca	340 ± 10	4 of 4	2.15	Up
Adult carcass	183 ± 13	4 of 4	1.20	None
Larval CNS	121 ± 57	4 of 4	0.77	None
Larval Salivary gland	201 ± 18	4 of 4	1.27	None
Larval midgut	259 ± 20	4 of 4	1.64	Up
Larval tubule	260 ± 13	4 of 4	1.60	Up
Larval hindgut	426 ± 27	4 of 4	2.69	Up
Larval fat body	149 ± 12	4 of 4	0.90	None
Larval trachea	49 ± 6	4 of 4	0.31	Down
Larval carcass	181 ± 4	4 of 4	1.15	None
S2 cells (growing)	247 ± 27	4 of 4	1.57	Up
Whole fly	158 ± 15	4 of 4

lethal (2) k11505 (olf186-F):

Annotation Number : CG11430
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0041585
Gbrowse : chr2R:13738383-13743293 (+) // 100.0 //
Probeset : 1637534_at
Accessions : protein= NP_001137696; /// NP_611273; /// NP_725727; /// NP_725728; /// NP_995881;, nucleotide= NM_001144224; /// NM_137429; /// NM_170626; /// NM_170627; /// NM_206159;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // non-trac
Interpro : 0004252 // serine-type endopeptidase activity // non-traceable author statement /// 0005216 // ion channel activity // i
FlyMine data for FBgn0041585.
BDGP gene expression has embryonic in situ data for olf186-F: 4 pix of staining in 1 body parts.
Homophila reports that CG11430 is a close match (3e-53) to human gene TMEM142A;CRACM1;ORAT1 (NP_116179), a gene associated with Severe combined immunodeficiency, autosomal recessive, with CRAC channel dysfunction (3).
BioGrid reports that CG11430 interacts with CG2851 .
VDRC has 2 RNAi stocks for FBgn0041585 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	68 ± 3	4 of 4	1.20	None
Head	41 ± 3	4 of 4	0.70	None
Eye	129 ± 13	4 of 4	2.21	Up
Thoracicoabdominal ganglion	79 ± 8	4 of 4	1.30	None
Salivary gland	22 ± 2	1 of 4	0.39	Down
Crop	24 ± 4	3 of 4	0.40	Down
Midgut	25 ± 1	4 of 4	0.40	Down
Tubule	42 ± 2	4 of 4	0.70	Down
Hindgut	57 ± 6	4 of 4	1.00	None
Heart	36 ± 4	4 of 4	0.62	None
Fat body	49 ± 10	4 of 4	0.85	None
Ovary	155 ± 7	4 of 4	2.70	Up
Testis	33 ± 0	4 of 4	0.60	None
Male accessory glands	28 ± 3	4 of 4	0.50	Down
Virgin spermatheca	49 ± 3	4 of 4	0.84	None
Mated spermatheca	47 ± 6	4 of 4	0.81	None
Adult carcass	60 ± 3	4 of 4	1.00	None
Larval CNS	141 ± 17	4 of 4	2.42	Up
Larval Salivary gland	75 ± 8	4 of 4	1.29	None
Larval midgut	67 ± 6	4 of 4	1.15	None
Larval tubule	32 ± 5	4 of 4	0.60	None
Larval hindgut	75 ± 12	4 of 4	1.28	None
Larval fat body	46 ± 4	4 of 4	0.80	None
Larval trachea	63 ± 17	4 of 4	1.08	None
Larval carcass	70 ± 12	4 of 4	1.19	None
S2 cells (growing)	314 ± 7	4 of 4	5.36	Up
Whole fly	58 ± 9	4 of 4

Looking for FBgn0041585. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720