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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0041624 through 18771 annotations produced 1 hits



Odorant receptor 65b (Or65b):

Annotation Number : CG32402
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0041624
Gbrowse : chr3L:6318774-6320149 (+) // 100.0 //
Probeset : 1635990_at
Accessions : protein= NP_729162;, nucleotide= NM_168164;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0041624.
TRiP has 1 RNAi stocks for FBgn0041624 available for purchase.
VDRC has 2 RNAi stocks for FBgn0041624 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 0.50None
Head12 ± 30 of 4 2.50None
Eye3 ± 10 of 4 0.75None
Thoracicoabdominal ganglion3 ± 10 of 4 0.80None
Salivary gland8 ± 40 of 4 1.66None
Crop5 ± 10 of 4 1.10None
Midgut7 ± 20 of 4 1.40None
Tubule5 ± 00 of 4 1.10None
Hindgut4 ± 00 of 4 0.90None
Heart3 ± 10 of 4 0.69None
Fat body7 ± 30 of 4 1.41None
Ovary2 ± 10 of 4 0.50None
Testis4 ± 10 of 4 0.90None
Male accessory glands11 ± 40 of 4 2.20None
Virgin spermatheca4 ± 10 of 4 0.95None
Mated spermatheca9 ± 20 of 4 1.92None
Adult carcass8 ± 10 of 4 1.60None
Larval CNS5 ± 30 of 4 1.05None
Larval Salivary gland2 ± 00 of 4 0.51None
Larval midgut6 ± 10 of 4 1.19None
Larval tubule3 ± 10 of 4 0.70None
Larval hindgut4 ± 10 of 4 0.81None
Larval fat body10 ± 30 of 4 2.00None
Larval trachea1 ± 10 of 4 0.33None
Larval carcass5 ± 10 of 4 1.11None
S2 cells (growing)1 ± 00 of 4 0.31None
Whole fly5 ± 10 of 4

Looking for FBgn0041624. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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