FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0041630 through 18771 annotations produced 2 hits

Hexosaminidase 1 (Hexo1):

Annotation Number : CG1318
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0041630
Gbrowse : chr3L:4288641-4291211 (+) // 100.0 //
Probeset : 1632188_at
Accessions : protein= NP_523924; /// NP_728974; /// NP_728975; /// NP_728976;, nucleotide= NM_079200; /// NM_168075; /// NM_168076; /// NM_168077;
Pathway : 0005886 // plasma membrane // inferred from direct assay
Interpro : "0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity
FlyMine data for FBgn0041630.
BDGP gene expression has embryonic in situ data for Hexo1: 17 pix of staining in 10 body parts.
Homophila reports that CG1318 is a close match (6e-39) to human gene HEXA;TSD (NP_000511), a gene associated with GM2-gangliosidosis, several forms, 272800 (3);Tay-Sachs disease, 272800 (3);[Hex A pseudodeficiency], 272800 (3).
VDRC has 1 RNAi stocks for FBgn0041630 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	425 ± 11	4 of 4	1.00	None
Head	806 ± 93	4 of 4	2.00	Up
Eye	1942 ± 131	4 of 4	4.70	Up
Thoracicoabdominal ganglion	727 ± 34	4 of 4	1.80	Up
Salivary gland	259 ± 10	4 of 4	0.63	Down
Crop	1628 ± 13	4 of 4	3.90	Up
Midgut	2431 ± 57	4 of 4	5.90	Up
Tubule	190 ± 9	4 of 4	0.50	Down
Hindgut	1120 ± 23	4 of 4	2.70	Up
Heart	325 ± 14	4 of 4	0.79	Down
Fat body	354 ± 34	4 of 4	0.86	None
Ovary	285 ± 6	4 of 4	0.70	Down
Testis	45 ± 3	4 of 4	0.10	Down
Male accessory glands	326 ± 8	4 of 4	0.80	Down
Virgin spermatheca	810 ± 35	4 of 4	1.96	Up
Mated spermatheca	623 ± 24	4 of 4	1.51	Up
Adult carcass	298 ± 10	4 of 4	0.70	Down
Larval CNS	393 ± 56	4 of 4	0.95	None
Larval Salivary gland	519 ± 40	4 of 4	1.26	None
Larval midgut	2653 ± 281	4 of 4	6.42	Up
Larval tubule	338 ± 14	4 of 4	0.80	Down
Larval hindgut	1139 ± 37	4 of 4	2.76	Up
Larval fat body	944 ± 142	4 of 4	2.30	Up
Larval trachea	1819 ± 113	4 of 4	4.41	Up
Larval carcass	761 ± 50	4 of 4	1.84	Up
S2 cells (growing)	253 ± 8	4 of 4	0.61	Down
Whole fly	413 ± 24	4 of 4

Hexosaminidase 1 (Hexo1):

Annotation Number : CG1318
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0041630
Gbrowse : chr3L:4288641-4291211 (+) // 100.0 //
Probeset : 1637510_s_at
Accessions : protein= NP_523924; /// NP_728974; /// NP_728975; /// NP_728976;, nucleotide= NM_079200; /// NM_168075; /// NM_168076; /// NM_168077;
Pathway : 0005886 // plasma membrane // inferred from direct assay
Interpro : "0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity
FlyMine data for FBgn0041630.
BDGP gene expression has embryonic in situ data for Hexo1: 17 pix of staining in 10 body parts.
Homophila reports that CG1318 is a close match (6e-39) to human gene HEXA;TSD (NP_000511), a gene associated with GM2-gangliosidosis, several forms, 272800 (3);Tay-Sachs disease, 272800 (3);[Hex A pseudodeficiency], 272800 (3).
VDRC has 1 RNAi stocks for FBgn0041630 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	244 ± 7	4 of 4	1.50	Up
Head	354 ± 23	4 of 4	2.20	Up
Eye	936 ± 87	4 of 4	5.84	Up
Thoracicoabdominal ganglion	384 ± 14	4 of 4	2.40	Up
Salivary gland	127 ± 23	4 of 4	0.80	None
Crop	724 ± 15	4 of 4	4.50	Up
Midgut	850 ± 12	4 of 4	5.30	Up
Tubule	127 ± 5	4 of 4	0.80	Down
Hindgut	586 ± 22	4 of 4	3.70	Up
Heart	150 ± 9	4 of 4	0.94	None
Fat body	149 ± 22	4 of 4	0.93	None
Ovary	126 ± 4	4 of 4	0.80	Down
Testis	31 ± 2	2 of 4	0.20	Down
Male accessory glands	183 ± 12	4 of 4	1.10	None
Virgin spermatheca	268 ± 8	4 of 4	1.67	Up
Mated spermatheca	226 ± 12	4 of 4	1.41	Up
Adult carcass	172 ± 11	4 of 4	1.10	None
Larval CNS	165 ± 17	4 of 4	1.03	None
Larval Salivary gland	235 ± 14	4 of 4	1.47	Up
Larval midgut	868 ± 109	4 of 4	5.41	Up
Larval tubule	149 ± 9	4 of 4	0.90	None
Larval hindgut	553 ± 19	4 of 4	3.45	Up
Larval fat body	288 ± 39	4 of 4	1.80	Up
Larval trachea	846 ± 56	4 of 4	5.27	Up
Larval carcass	530 ± 44	4 of 4	3.31	Up
S2 cells (growing)	162 ± 5	4 of 4	1.01	None
Whole fly	160 ± 8	4 of 4

Looking for FBgn0041630. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720