FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0041789 through 18771 annotations produced 1 hits

paxillin (Pax):

Annotation Number : CG31794
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0041789
Gbrowse : chr2L:19400774-19426424 (-) // 100.0 //
Probeset : 1626624_s_at
Accessions : protein= NP_001033913; /// NP_523601; /// NP_724183; /// NP_724184; /// NP_724185; /// NP_724186;, nucleotide= NM_001038824; /// NM_078877; /// NM_165293; /// NM_165294; /// NM_165295; /// NM_165296;
Pathway : 0005925 // focal adhesion // inferred from sequence or structural similarity /// 0005925 // focal adhesion // non-tracea
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electr
FlyMine data for FBgn0041789.
BDGP gene expression has embryonic in situ data for Pax: 24 pix of staining in 12 body parts.
Homophila reports that CG31794 is a close match (2e-11) to human gene LHX3 (NP_835258), a gene associated with Pituitary hormone deficiency, combined, with rigid cervical spine, 262600 (3).
BioGrid reports that CG31794 interacts with CG3299 CG4795 CG7602 CG6945 .
TRiP has 1 RNAi stocks for FBgn0041789 available for purchase.
VDRC has 2 RNAi stocks for FBgn0041789 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	83 ± 2	4 of 4	1.00	None
Head	74 ± 9	4 of 4	0.90	None
Eye	61 ± 4	4 of 4	0.73	None
Thoracicoabdominal ganglion	138 ± 5	4 of 4	1.60	Up
Salivary gland	372 ± 11	4 of 4	4.42	Up
Crop	233 ± 11	4 of 4	2.80	Up
Midgut	107 ± 4	4 of 4	1.30	None
Tubule	84 ± 6	4 of 4	1.00	None
Hindgut	239 ± 7	4 of 4	2.80	Up
Heart	121 ± 11	4 of 4	1.44	None
Fat body	105 ± 13	4 of 4	1.26	None
Ovary	81 ± 6	4 of 4	1.00	None
Testis	42 ± 4	4 of 4	0.50	None
Male accessory glands	135 ± 14	4 of 4	1.60	None
Virgin spermatheca	45 ± 3	4 of 4	0.53	None
Mated spermatheca	76 ± 3	4 of 4	0.91	None
Adult carcass	244 ± 13	4 of 4	2.90	Up
Larval CNS	163 ± 8	4 of 4	1.94	Up
Larval Salivary gland	427 ± 22	4 of 4	5.07	Up
Larval midgut	352 ± 18	4 of 4	4.18	Up
Larval tubule	167 ± 14	4 of 4	2.00	Up
Larval hindgut	593 ± 19	4 of 4	7.04	Up
Larval fat body	81 ± 6	4 of 4	1.00	None
Larval trachea	246 ± 17	4 of 4	2.92	Up
Larval carcass	501 ± 29	4 of 4	5.96	Up
S2 cells (growing)	640 ± 11	4 of 4	7.60	Up
Whole fly	84 ± 16	4 of 4

Looking for FBgn0041789. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720