FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0042083 through 18771 annotations produced 1 hits

(CG3267):

Annotation Number : CG3267
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0042083
Gbrowse : chr2R:2633889-2636459 (+) // 100.0 //
Probeset : 1625839_at
Accessions : protein= NP_652724;, nucleotide= NM_144467;
Pathway : 0005739 // mitochondrion // inferred from electronic annotation /// 0005759 // mitochondrial matrix // inferred from seq
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004485 // methylcrotonoyl-CoA carboxylase acti
FlyMine data for FBgn0042083.
BDGP gene expression has embryonic in situ data for CG3267: 13 pix of staining in 11 body parts.
Homophila reports that CG3267 is a close match (1e-61) to human gene PCCB (NP_000523), a gene associated with Propionicacidemia, 606054 (3).
VDRC has 2 RNAi stocks for FBgn0042083 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	22 ± 1	4 of 4	0.20	Down
Head	87 ± 5	4 of 4	0.80	Down
Eye	46 ± 8	4 of 4	0.42	Down
Thoracicoabdominal ganglion	24 ± 2	4 of 4	0.20	Down
Salivary gland	91 ± 6	4 of 4	0.84	None
Crop	120 ± 3	4 of 4	1.10	None
Midgut	79 ± 7	4 of 4	0.70	Down
Tubule	645 ± 68	4 of 4	5.90	Up
Hindgut	125 ± 4	4 of 4	1.20	None
Heart	194 ± 16	4 of 4	1.79	Up
Fat body	350 ± 16	4 of 4	3.21	Up
Ovary	161 ± 3	4 of 4	1.50	Up
Testis	12 ± 1	4 of 4	0.10	Down
Male accessory glands	35 ± 1	4 of 4	0.30	Down
Virgin spermatheca	133 ± 6	4 of 4	1.23	Up
Mated spermatheca	110 ± 7	4 of 4	1.02	None
Adult carcass	182 ± 13	4 of 4	1.70	Up
Larval CNS	65 ± 9	4 of 4	0.60	Down
Larval Salivary gland	161 ± 6	4 of 4	1.48	Up
Larval midgut	116 ± 3	4 of 4	1.07	None
Larval tubule	78 ± 4	4 of 4	0.70	Down
Larval hindgut	324 ± 25	4 of 4	2.98	Up
Larval fat body	48 ± 7	4 of 4	0.40	Down
Larval trachea	141 ± 11	4 of 4	1.30	Up
Larval carcass	147 ± 15	4 of 4	1.35	None
S2 cells (growing)	128 ± 5	4 of 4	1.18	None
Whole fly	108 ± 6	4 of 4

Looking for FBgn0042083. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720