FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0042174 through 18771 annotations produced 2 hits

(CR18854):

Annotation Number : CG18854
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0042174
Gbrowse : chr2L:9787278-9790745 (-) // 100.0 //
Probeset : 1633135_s_at
Accessions : protein= NP_652699;, nucleotide= NM_144442;
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008440 // inositol trisphosphate 3-kinase activity
FlyMine data for FBgn0042174.
BDGP gene expression has embryonic in situ data for CG18854: 13 pix of staining in 12 body parts.
BioGrid reports that CG18854 interacts with CG30084 CG5471 CG7787 CG3011 CG32772 CG5053 CG6382 CG6667 CG6779 CG7264 CG7832 CG8815 .
TRiP has 2 RNAi stocks for FBgn0042174 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1483 ± 42	4 of 4	2.60	Up
Head	1040 ± 38	4 of 4	1.80	Up
Eye	1877 ± 107	4 of 4	3.33	Up
Thoracicoabdominal ganglion	2010 ± 70	4 of 4	3.60	Up
Salivary gland	1497 ± 11	4 of 4	2.65	Up
Crop	1088 ± 30	4 of 4	1.90	Up
Midgut	342 ± 15	4 of 4	0.60	None
Tubule	569 ± 44	4 of 4	1.00	None
Hindgut	1147 ± 33	4 of 4	2.00	Up
Heart	1747 ± 91	4 of 4	3.10	Up
Fat body	1443 ± 110	4 of 4	2.56	Up
Ovary	341 ± 51	4 of 4	0.60	None
Testis	245 ± 15	4 of 4	0.40	Down
Male accessory glands	984 ± 96	4 of 4	1.70	Up
Virgin spermatheca	659 ± 23	4 of 4	1.17	None
Mated spermatheca	713 ± 48	4 of 4	1.26	None
Adult carcass	1611 ± 47	4 of 4	2.90	Up
Larval CNS	864 ± 26	4 of 4	1.53	Up
Larval Salivary gland	1342 ± 100	4 of 4	2.38	Up
Larval midgut	784 ± 76	4 of 4	1.39	None
Larval tubule	902 ± 19	4 of 4	1.60	Up
Larval hindgut	1239 ± 25	4 of 4	2.20	Up
Larval fat body	197 ± 19	4 of 4	0.30	Down
Larval trachea	1458 ± 70	4 of 4	2.58	Up
Larval carcass	1293 ± 122	4 of 4	2.29	Up
S2 cells (growing)	1517 ± 34	4 of 4	2.69	Up
Whole fly	564 ± 74	4 of 4

/// struthio (CR18854 /// how):

Annotation Number : CG10293
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0017397
Gbrowse : chr3R:17867953-17898092 (+) // 100.0 //
Probeset : 1638639_a_at
Accessions : protein= NP_001027203; /// NP_001163683; /// NP_001163684; /// NP_524447; /// NP_732695;, nucleotide= NM_001032032; /// NM_001170212; /// NM_001170213; /// NM_079723; /// NM_169992;
Pathway : via spliceosome // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from mutant phenotype /// 00
Interpro : 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus //
FlyMine data for FBgn0017397.
BDGP gene expression has embryonic in situ data for how: 38 pix of staining in 21 body parts.
BioGrid reports that CG10293 interacts with CG12932 CG3488 CG10699 CG12812 CG13030 CG1740 CG3510 CG4818 CG31054 CG4849 CG9623 CG30422 .
VDRC has 2 RNAi stocks for FBgn0017397 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 2	0 of 4	0.20	Down
Head	32 ± 10	0 of 4	0.70	None
Eye	32 ± 5	4 of 4	0.71	None
Thoracicoabdominal ganglion	4 ± 1	0 of 4	0.10	Down
Salivary gland	17 ± 8	0 of 4	0.38	Down
Crop	76 ± 8	4 of 4	1.70	Up
Midgut	2 ± 0	0 of 4	0.10	Down
Tubule	10 ± 1	0 of 4	0.20	Down
Hindgut	44 ± 7	1 of 4	1.00	None
Heart	42 ± 4	4 of 4	0.92	None
Fat body	25 ± 13	0 of 4	0.54	None
Ovary	50 ± 4	3 of 4	1.10	None
Testis	6 ± 1	0 of 4	0.10	Down
Male accessory glands	14 ± 1	0 of 4	0.30	Down
Virgin spermatheca	8 ± 1	0 of 4	0.18	Down
Mated spermatheca	16 ± 4	0 of 4	0.36	Down
Adult carcass	42 ± 8	0 of 4	0.90	None
Larval CNS	3 ± 3	0 of 4	0.08	Down
Larval Salivary gland	14 ± 1	1 of 4	0.32	Down
Larval midgut	3 ± 0	0 of 4	0.07	Down
Larval tubule	44 ± 6	1 of 4	1.00	None
Larval hindgut	19 ± 4	0 of 4	0.41	Down
Larval fat body	28 ± 2	0 of 4	0.60	None
Larval trachea	106 ± 9	4 of 4	2.30	Up
Larval carcass	40 ± 9	1 of 4	0.88	None
S2 cells (growing)	46 ± 4	3 of 4	1.02	None
Whole fly	46 ± 6	2 of 4

Looking for FBgn0042174. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720