FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0042189 through 18771 annotations produced 3 hits

(CG17376):

Annotation Number : CG17376
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0042189
Gbrowse : chr2L:6799938-6800834 (-) // 100.0 //
Probeset : 1636364_a_at
Accessions : protein= NP_652707; /// NP_723218;, nucleotide= NM_144450; /// NM_164712;
FlyMine data for FBgn0042189.
BioGrid reports that CG17376 interacts with CG3056 CG9573 .
VDRC has 4 RNAi stocks for FBgn0042189 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 1	0 of 4	0.00	Down
Head	3 ± 2	1 of 4	0.00	Down
Eye	3 ± 1	1 of 4	0.00	Down
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.00	Down
Salivary gland	6 ± 2	0 of 4	0.01	Down
Crop	1 ± 0	0 of 4	0.00	Down
Midgut	1 ± 0	0 of 4	0.00	Down
Tubule	9 ± 3	1 of 4	0.00	Down
Hindgut	2 ± 1	0 of 4	0.00	Down
Heart	5 ± 1	1 of 4	0.00	Down
Fat body	5 ± 2	0 of 4	0.00	Down
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	3500 ± 236	4 of 4	2.80	Up
Male accessory glands	1 ± 0	0 of 4	0.00	Down
Virgin spermatheca	3 ± 1	1 of 4	0.00	Down
Mated spermatheca	14 ± 5	3 of 4	0.01	Down
Adult carcass	34 ± 11	3 of 4	0.00	Down
Larval CNS	3 ± 1	1 of 4	0.00	Down
Larval Salivary gland	1 ± 1	1 of 4	0.00	Down
Larval midgut	6 ± 2	0 of 4	0.01	Down
Larval tubule	1 ± 0	0 of 4	0.00	Down
Larval hindgut	4 ± 1	2 of 4	0.00	Down
Larval fat body	973 ± 433	4 of 4	0.80	None
Larval trachea	67 ± 113	3 of 4	0.05	Down
Larval carcass	5 ± 1	2 of 4	0.00	Down
S2 cells (growing)	1 ± 0	0 of 4	0.00	Down
Whole fly	1246 ± 55	4 of 4

(CG17376):

Annotation Number : CG17376
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0042189
Gbrowse : chr2L:6799938-6800834 (-) // 100.0 //
Probeset : 1639779_at
Accessions : protein= NP_652707; /// NP_723218;, nucleotide= NM_144450; /// NM_164712;
FlyMine data for FBgn0042189.
BioGrid reports that CG17376 interacts with CG3056 CG9573 .
VDRC has 4 RNAi stocks for FBgn0042189 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	7 ± 1	0 of 4	0.00	Down
Head	10 ± 2	0 of 4	0.00	Down
Eye	7 ± 2	1 of 4	0.02	Down
Thoracicoabdominal ganglion	14 ± 1	1 of 4	0.00	Down
Salivary gland	46 ± 3	1 of 4	0.10	Down
Crop	14 ± 0	1 of 4	0.00	Down
Midgut	28 ± 5	2 of 4	0.10	Down
Tubule	15 ± 1	0 of 4	0.00	Down
Hindgut	14 ± 2	0 of 4	0.00	Down
Heart	9 ± 2	1 of 4	0.02	Down
Fat body	14 ± 10	0 of 4	0.03	Down
Ovary	4 ± 1	0 of 4	0.00	Down
Testis	2396 ± 122	4 of 4	5.20	Up
Male accessory glands	17 ± 4	1 of 4	0.00	Down
Virgin spermatheca	14 ± 1	1 of 4	0.03	Down
Mated spermatheca	14 ± 2	1 of 4	0.03	Down
Adult carcass	40 ± 5	2 of 4	0.10	Down
Larval CNS	4 ± 3	1 of 4	0.01	Down
Larval Salivary gland	25 ± 2	2 of 4	0.05	Down
Larval midgut	44 ± 2	3 of 4	0.10	Down
Larval tubule	19 ± 0	1 of 4	0.00	Down
Larval hindgut	11 ± 1	0 of 4	0.03	Down
Larval fat body	261 ± 102	4 of 4	0.60	None
Larval trachea	27 ± 35	1 of 4	0.06	Down
Larval carcass	11 ± 2	0 of 4	0.02	Down
S2 cells (growing)	5 ± 1	0 of 4	0.01	Down
Whole fly	462 ± 22	4 of 4

(CG17376):

Annotation Number : CG17376
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0042189
Gbrowse : chr2L:6799938-6800834 (-) // 100.0 //
Probeset : 1629670_at
Accessions : protein= NP_652707; /// NP_723218;, nucleotide= NM_144450; /// NM_164712;
FlyMine data for FBgn0042189.
BioGrid reports that CG17376 interacts with CG3056 CG9573 .
VDRC has 4 RNAi stocks for FBgn0042189 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.00	Down
Head	2 ± 1	0 of 4	0.00	Down
Eye	6 ± 1	1 of 4	0.01	Down
Thoracicoabdominal ganglion	5 ± 1	0 of 4	0.00	Down
Salivary gland	18 ± 7	0 of 4	0.02	Down
Crop	3 ± 1	0 of 4	0.00	Down
Midgut	1 ± 0	0 of 4	0.00	Down
Tubule	8 ± 2	0 of 4	0.00	Down
Hindgut	3 ± 1	0 of 4	0.00	Down
Heart	3 ± 1	0 of 4	0.00	Down
Fat body	1 ± 0	0 of 4	0.00	Down
Ovary	1 ± 0	0 of 4	0.00	Down
Testis	3306 ± 176	4 of 4	3.00	Up
Male accessory glands	2 ± 1	0 of 4	0.00	Down
Virgin spermatheca	1 ± 0	0 of 4	0.00	Down
Mated spermatheca	3 ± 1	0 of 4	0.00	Down
Adult carcass	35 ± 9	3 of 4	0.00	Down
Larval CNS	1 ± 0	0 of 4	0.00	Down
Larval Salivary gland	4 ± 2	0 of 4	0.00	Down
Larval midgut	6 ± 0	1 of 4	0.01	Down
Larval tubule	2 ± 0	0 of 4	0.00	Down
Larval hindgut	4 ± 1	1 of 4	0.00	Down
Larval fat body	517 ± 271	4 of 4	0.50	None
Larval trachea	51 ± 83	3 of 4	0.05	Down
Larval carcass	6 ± 1	0 of 4	0.01	Down
S2 cells (growing)	0 ± 0	0 of 4	0.00	Down
Whole fly	1100 ± 42	4 of 4

Looking for FBgn0042189. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720