FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0042693 through 18771 annotations produced 2 hits

PP2A B' subunit (PP2A-B):

Annotation Number : CG7913
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0042693
Gbrowse : chr3R:13993450-14002963 (+) // 100.0 //
Probeset : 1640602_s_at
Accessions : protein= NP_001138070; /// NP_001138071; /// NP_001138072; /// NP_650681; /// NP_732293; /// NP_732294; /// NP_732295; /// NP_732296;, nucleotide= NM_001144598; /// NM_001144599; /// NM_001144600; /// NM_142424; /// NM_169787; /// NM_169788; /// NM_169789; /// NM_169790;
Pathway : 0000159 // protein phosphatase type 2A complex // inferred from electronic annotation /// 0000159 // protein phosphatase
Interpro : 0005488 // binding // inferred from electronic annotation /// 0008601 // protein phosphatase type 2A regulator activity
FlyMine data for FBgn0042693.
BDGP gene expression has embryonic in situ data for PP2A-B': 4 pix of staining in 1 body parts.
BioGrid reports that CG7913 interacts with CG8235 .
TRiP has 2 RNAi stocks for FBgn0042693 available for purchase.
VDRC has 3 RNAi stocks for FBgn0042693 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	304 ± 7	4 of 4	1.90	Up
Head	112 ± 8	4 of 4	0.70	Down
Eye	138 ± 1	4 of 4	0.86	Down
Thoracicoabdominal ganglion	189 ± 17	4 of 4	1.20	None
Salivary gland	80 ± 5	4 of 4	0.50	Down
Crop	121 ± 17	4 of 4	0.80	None
Midgut	151 ± 4	4 of 4	0.90	None
Tubule	82 ± 4	4 of 4	0.50	Down
Hindgut	165 ± 6	4 of 4	1.00	None
Heart	75 ± 5	4 of 4	0.47	Down
Fat body	131 ± 18	4 of 4	0.82	Down
Ovary	313 ± 9	4 of 4	2.00	Up
Testis	168 ± 6	4 of 4	1.10	None
Male accessory glands	208 ± 12	4 of 4	1.30	Up
Virgin spermatheca	66 ± 9	4 of 4	0.41	Down
Mated spermatheca	58 ± 2	4 of 4	0.37	Down
Adult carcass	135 ± 11	4 of 4	0.80	None
Larval CNS	220 ± 8	4 of 4	1.37	Up
Larval Salivary gland	120 ± 7	4 of 4	0.75	Down
Larval midgut	75 ± 3	4 of 4	0.47	Down
Larval tubule	77 ± 6	4 of 4	0.50	Down
Larval hindgut	90 ± 1	4 of 4	0.56	Down
Larval fat body	104 ± 13	4 of 4	0.70	Down
Larval trachea	67 ± 8	4 of 4	0.42	Down
Larval carcass	59 ± 3	4 of 4	0.37	Down
S2 cells (growing)	181 ± 2	4 of 4	1.13	Up
Whole fly	160 ± 5	4 of 4

PP2A B' subunit (PP2A-B):

Annotation Number : CG7913
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0042693
Gbrowse : chr3R:13998565-14003768 (+) // 100.0 //
Probeset : 1628476_at
Accessions : protein= NP_001138070; /// NP_001138071; /// NP_001138072; /// NP_650681; /// NP_732293; /// NP_732294; /// NP_732295; /// NP_732296;, nucleotide= NM_001144598; /// NM_001144599; /// NM_001144600; /// NM_142424; /// NM_169787; /// NM_169788; /// NM_169789; /// NM_169790;
Pathway : 0000159 // protein phosphatase type 2A complex // inferred from electronic annotation /// 0000159 // protein phosphatase
Interpro : 0005488 // binding // inferred from electronic annotation /// 0008601 // protein phosphatase type 2A regulator activity
FlyMine data for FBgn0042693.
BDGP gene expression has embryonic in situ data for PP2A-B': 4 pix of staining in 1 body parts.
BioGrid reports that CG7913 interacts with CG8235 .
TRiP has 2 RNAi stocks for FBgn0042693 available for purchase.
VDRC has 3 RNAi stocks for FBgn0042693 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	38 ± 2	4 of 4	0.90	None
Head	78 ± 2	4 of 4	1.90	Up
Eye	43 ± 4	4 of 4	1.07	None
Thoracicoabdominal ganglion	46 ± 1	4 of 4	1.10	None
Salivary gland	76 ± 12	4 of 4	1.89	None
Crop	116 ± 1	4 of 4	2.90	Up
Midgut	57 ± 5	4 of 4	1.40	None
Tubule	121 ± 8	4 of 4	3.00	Up
Hindgut	116 ± 4	4 of 4	2.90	Up
Heart	85 ± 4	4 of 4	2.13	Up
Fat body	193 ± 28	4 of 4	4.81	Up
Ovary	29 ± 1	4 of 4	0.70	None
Testis	19 ± 2	4 of 4	0.50	Down
Male accessory glands	60 ± 1	4 of 4	1.50	Up
Virgin spermatheca	167 ± 9	4 of 4	4.15	Up
Mated spermatheca	115 ± 3	4 of 4	2.86	Up
Adult carcass	136 ± 9	4 of 4	3.40	Up
Larval CNS	12 ± 2	4 of 4	0.32	Down
Larval Salivary gland	15 ± 1	4 of 4	0.39	Down
Larval midgut	34 ± 1	3 of 4	0.85	None
Larval tubule	127 ± 4	4 of 4	3.20	Up
Larval hindgut	46 ± 3	4 of 4	1.14	None
Larval fat body	35 ± 3	4 of 4	0.90	None
Larval trachea	36 ± 6	4 of 4	0.91	None
Larval carcass	22 ± 0	4 of 4	0.57	Down
S2 cells (growing)	31 ± 2	4 of 4	0.79	None
Whole fly	40 ± 5	4 of 4

Looking for FBgn0042693. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720