FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0042696 through 18771 annotations produced 1 hits

Nuclear factor I (NfI):

Annotation Number : CG2380
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0042696
Gbrowse : chr4:290814-296993 (-) // 100.0 //
Probeset : 1630840_at
Accessions : protein= NP_995592;, nucleotide= NM_205870;
Pathway : DNA-dependent // inferred from electronic annotation /// 0045449 // regulation of transcription // inferred from electr
Interpro : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or stru
FlyMine data for FBgn0042696.
TRiP has 1 RNAi stocks for FBgn0042696 available for purchase.
VDRC has 2 RNAi stocks for FBgn0042696 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	119 ± 8	4 of 4	5.70	Up
Head	34 ± 7	4 of 4	1.60	None
Eye	12 ± 1	4 of 4	0.59	None
Thoracicoabdominal ganglion	45 ± 11	4 of 4	2.20	None
Salivary gland	5 ± 1	0 of 4	0.27	Down
Crop	33 ± 5	4 of 4	1.60	None
Midgut	1 ± 0	0 of 4	0.10	Down
Tubule	2 ± 0	0 of 4	0.10	Down
Hindgut	14 ± 2	4 of 4	0.70	None
Heart	12 ± 1	4 of 4	0.59	None
Fat body	7 ± 0	0 of 4	0.37	None
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	0 ± 0	0 of 4	0.00	Down
Male accessory glands	4 ± 0	1 of 4	0.20	Down
Virgin spermatheca	5 ± 0	0 of 4	0.26	Down
Mated spermatheca	6 ± 0	1 of 4	0.30	Down
Adult carcass	68 ± 6	4 of 4	3.30	Up
Larval CNS	15 ± 3	4 of 4	0.76	None
Larval Salivary gland	4 ± 1	1 of 4	0.23	Down
Larval midgut	2 ± 0	0 of 4	0.13	Down
Larval tubule	1 ± 0	0 of 4	0.10	Down
Larval hindgut	6 ± 0	4 of 4	0.32	None
Larval fat body	3 ± 1	1 of 4	0.20	Down
Larval trachea	3 ± 1	0 of 4	0.15	Down
Larval carcass	23 ± 1	4 of 4	1.12	None
S2 cells (growing)	2 ± 0	0 of 4	0.11	Down
Whole fly	20 ± 4	4 of 4

Looking for FBgn0042696. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720