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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0043530 through 18771 annotations produced 1 hits



Odorant-binding protein 51a (Obp51a):

Annotation Number : CG30473
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0043530
Gbrowse : chr2R:10911923-10912344 (-) // 100.0 //
Probeset : 1629208_at
Accessions : protein= NP_725436;, nucleotide= NM_166079;
Interpro : 0005549 // odorant binding // not recorded /// 0005549 // odorant binding // inferred from sequence or structural simila
FlyMine data for FBgn0043530.
VDRC has 2 RNAi stocks for FBgn0043530 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 01 of 4 0.00Down
Head3 ± 10 of 4 0.00Down
Eye1 ± 00 of 4 0.00Down
Thoracicoabdominal ganglion1 ± 00 of 4 0.00Down
Salivary gland4 ± 10 of 4 0.01Down
Crop4 ± 11 of 4 0.00Down
Midgut5 ± 10 of 4 0.00Down
Tubule4 ± 00 of 4 0.00Down
Hindgut3 ± 00 of 4 0.00Down
Heart3 ± 01 of 4 0.00Down
Fat body7 ± 42 of 4 0.01Down
Ovary0 ± 00 of 4 0.00Down
Testis56 ± 184 of 4 0.10Down
Male accessory glands2173 ± 3094 of 4 2.90Up
Virgin spermatheca3 ± 00 of 4 0.00Down
Mated spermatheca3 ± 10 of 4 0.00Down
Adult carcass4 ± 11 of 4 0.00Down
Larval CNS2 ± 10 of 4 0.00Down
Larval Salivary gland1 ± 00 of 4 0.00Down
Larval midgut5 ± 10 of 4 0.01Down
Larval tubule3 ± 10 of 4 0.00Down
Larval hindgut3 ± 11 of 4 0.00Down
Larval fat body11 ± 11 of 4 0.00Down
Larval trachea2 ± 10 of 4 0.00Down
Larval carcass2 ± 00 of 4 0.00Down
S2 cells (growing)2 ± 00 of 4 0.00Down
Whole fly746 ± 754 of 4

Looking for FBgn0043530. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime