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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0043535 through 18771 annotations produced 1 hits



Odorant-binding protein 57a (Obp57a):

Annotation Number : CG30141
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0043535
Gbrowse : chr2R:16392673-16393234 (+) // 100.0 //
Probeset : 1626586_at
Accessions : protein= NP_725966;, nucleotide= NM_166395;
Interpro : 0005549 // odorant binding // not recorded /// 0005549 // odorant binding // inferred from sequence or structural simila
FlyMine data for FBgn0043535.
BioGrid reports that CG30141 interacts with CG5094 .
VDRC has 2 RNAi stocks for FBgn0043535 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 ± 12 of 4 0.00Down
Head768 ± 464 of 4 1.20None
Eye164 ± 124 of 4 0.25Down
Thoracicoabdominal ganglion22 ± 64 of 4 0.00Down
Salivary gland11 ± 21 of 4 0.02Down
Crop86 ± 74 of 4 0.10Down
Midgut5 ± 12 of 4 0.00Down
Tubule4 ± 00 of 4 0.00Down
Hindgut41 ± 24 of 4 0.10Down
Heart38 ± 14 of 4 0.06Down
Fat body37 ± 134 of 4 0.06Down
Ovary31 ± 54 of 4 0.00Down
Testis7 ± 14 of 4 0.00Down
Male accessory glands4 ± 20 of 4 0.00Down
Virgin spermatheca760 ± 104 of 4 1.16None
Mated spermatheca797 ± 1264 of 4 1.21None
Adult carcass1488 ± 374 of 4 2.30Up
Larval CNS5 ± 21 of 4 0.01Down
Larval Salivary gland3 ± 21 of 4 0.01Down
Larval midgut5 ± 00 of 4 0.01Down
Larval tubule3 ± 10 of 4 0.00Down
Larval hindgut3 ± 00 of 4 0.01Down
Larval fat body7 ± 11 of 4 0.00Down
Larval trachea4 ± 21 of 4 0.01Down
Larval carcass9 ± 13 of 4 0.01Down
S2 cells (growing)2 ± 00 of 4 0.00Down
Whole fly658 ± 384 of 4

Looking for FBgn0043535. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime