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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0043806 through 18771 annotations produced 1 hits



(CG32032):

Annotation Number : CG32032
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0043806
Gbrowse : chr3L:9086153-9087824 (+) // 100.0 //
Probeset : 1629205_at
Accessions : protein= NP_729454;, nucleotide= NM_168317;
Interpro : 0005488 // binding // inferred from electronic annotation
FlyMine data for FBgn0043806.
VDRC has 1 RNAi stocks for FBgn0043806 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain514 ± 204 of 4 9.80Up
Head498 ± 114 of 4 9.50Up
Eye664 ± 234 of 412.68Up
Thoracicoabdominal ganglion565 ± 94 of 410.80Up
Salivary gland9 ± 30 of 4 0.19Down
Crop13 ± 23 of 4 0.30Down
Midgut10 ± 11 of 4 0.20Down
Tubule11 ± 12 of 4 0.20Down
Hindgut174 ± 34 of 4 3.30Up
Heart210 ± 114 of 4 4.02Up
Fat body334 ± 204 of 4 6.39Up
Ovary5 ± 01 of 4 0.10Down
Testis28 ± 14 of 4 0.50Down
Male accessory glands40 ± 24 of 4 0.80Down
Virgin spermatheca267 ± 54 of 4 5.11Up
Mated spermatheca150 ± 134 of 4 2.87Up
Adult carcass282 ± 174 of 4 5.40Up
Larval CNS514 ± 694 of 4 9.82Up
Larval Salivary gland17 ± 24 of 4 0.33Down
Larval midgut6 ± 11 of 4 0.12Down
Larval tubule10 ± 04 of 4 0.20Down
Larval hindgut516 ± 274 of 4 9.86Up
Larval fat body315 ± 264 of 4 6.00Up
Larval trachea29 ± 104 of 4 0.57Down
Larval carcass74 ± 34 of 4 1.42Up
S2 cells (growing)891 ± 234 of 417.02Up
Whole fly52 ± 24 of 4

Looking for FBgn0043806. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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