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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0043842 through 18771 annotations produced 1 hits



Yeti (Yeti):

Annotation Number : CG40218
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0043842
Gbrowse : chr2RHet:470776-471747 (-) // 100.0 //
Probeset : 1625290_at
Accessions : protein= NP_001137537;, nucleotide= NM_001144065;
Interpro : 0019894 // kinesin binding // inferred from direct assay
FlyMine data for FBgn0043842.
VDRC has 1 RNAi stocks for FBgn0043842 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1526 ± 224 of 4 1.10None
Head1479 ± 694 of 4 1.00None
Eye1650 ± 334 of 4 1.16None
Thoracicoabdominal ganglion1673 ± 624 of 4 1.20None
Salivary gland1827 ± 334 of 4 1.29Up
Crop1655 ± 384 of 4 1.20None
Midgut1434 ± 384 of 4 1.00None
Tubule1799 ± 184 of 4 1.30Up
Hindgut1589 ± 354 of 4 1.10None
Heart1432 ± 204 of 4 1.01None
Fat body1017 ± 924 of 4 0.72Down
Ovary2063 ± 584 of 4 1.50Up
Testis889 ± 164 of 4 0.60Down
Male accessory glands2122 ± 514 of 4 1.50Up
Virgin spermatheca1633 ± 194 of 4 1.15None
Mated spermatheca1592 ± 624 of 4 1.12None
Adult carcass1103 ± 1064 of 4 0.80None
Larval CNS1271 ± 374 of 4 0.89None
Larval Salivary gland1435 ± 444 of 4 1.01None
Larval midgut975 ± 294 of 4 0.69Down
Larval tubule2666 ± 564 of 4 1.90Up
Larval hindgut1110 ± 154 of 4 0.78Down
Larval fat body3596 ± 4624 of 4 2.50Up
Larval trachea1359 ± 624 of 4 0.96None
Larval carcass1183 ± 574 of 4 0.83None
S2 cells (growing)919 ± 114 of 4 0.65Down
Whole fly1421 ± 874 of 4

Looking for FBgn0043842. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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