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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0044046 through 18771 annotations produced 1 hits



Drosophila insulin-like peptide 7 (Ilp7):

Annotation Number : CG13317
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0044046
Gbrowse : chrX:3562076-3562737 (+) // 100.0 //
Probeset : 1624169_at
Accessions : protein= NP_570070;, nucleotide= NM_130714;
Pathway : 0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region /
Interpro : 0005158 // insulin receptor binding // inferred from sequence or structural similarity /// 0005179 // hormone activity /
FlyMine data for FBgn0044046.
BioGrid reports that CG13317 interacts with CG7977 .
TRiP has 2 RNAi stocks for FBgn0044046 available for purchase.
VDRC has 3 RNAi stocks for FBgn0044046 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 11 of 4 0.80None
Head1 00 of 4 0.20Down
Eye4 10 of 4 0.47Down
Thoracicoabdominal ganglion160 114 of 416.40Up
Salivary gland7 20 of 4 0.72None
Crop1 00 of 4 0.10Down
Midgut1 00 of 4 0.20Down
Tubule3 00 of 4 0.30Down
Hindgut1 00 of 4 0.10Down
Heart1 00 of 4 0.16Down
Fat body11 72 of 4 1.22None
Ovary16 34 of 4 1.70None
Testis5 11 of 4 0.50None
Male accessory glands1 10 of 4 0.20Down
Virgin spermatheca9 00 of 4 0.98None
Mated spermatheca11 22 of 4 1.14None
Adult carcass3 10 of 4 0.30Down
Larval CNS36 54 of 4 3.68Up
Larval Salivary gland7 20 of 4 0.72None
Larval midgut4 10 of 4 0.44Down
Larval tubule2 10 of 4 0.30Down
Larval hindgut4 00 of 4 0.41Down
Larval fat body2 10 of 4 0.20Down
Larval trachea3 20 of 4 0.40Down
Larval carcass4 00 of 4 0.48Down
S2 cells (growing)0 00 of 4 0.08Down
Whole fly9 11 of 4

Looking for FBgn0044046. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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