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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0044047 through 18771 annotations produced 1 hits



Drosophila insulin-like peptide 6 (Ilp6):

Annotation Number : CG14049
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0044047
Gbrowse : chrX:2225770-2226172 (-) // 100.0 //
Probeset : 1636242_at
Accessions : protein= NP_570000;, nucleotide= NM_130644;
Pathway : 0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region /
Interpro : 0005158 // insulin receptor binding // inferred from sequence or structural similarity /// 0005179 // hormone activity /
FlyMine data for FBgn0044047.
BioGrid reports that CG14049 interacts with CG4087 .
TRiP has 2 RNAi stocks for FBgn0044047 available for purchase.
VDRC has 2 RNAi stocks for FBgn0044047 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain98 ± 54 of 4 3.20Up
Head150 ± 84 of 4 4.90Up
Eye59 ± 114 of 4 1.95None
Thoracicoabdominal ganglion68 ± 34 of 4 2.20Up
Salivary gland41 ± 43 of 4 1.34None
Crop13 ± 11 of 4 0.40Down
Midgut1 ± 00 of 4 0.00Down
Tubule10 ± 01 of 4 0.30Down
Hindgut9 ± 12 of 4 0.30Down
Heart66 ± 84 of 4 2.16Up
Fat body73 ± 224 of 4 2.38Up
Ovary23 ± 54 of 4 0.80None
Testis40 ± 34 of 4 1.30None
Male accessory glands2 ± 00 of 4 0.10Down
Virgin spermatheca54 ± 64 of 4 1.77Up
Mated spermatheca43 ± 54 of 4 1.43None
Adult carcass69 ± 64 of 4 2.30Up
Larval CNS62 ± 144 of 4 2.02Up
Larval Salivary gland184 ± 454 of 4 6.00Up
Larval midgut8 ± 00 of 4 0.26Down
Larval tubule24 ± 34 of 4 0.80None
Larval hindgut13 ± 04 of 4 0.44Down
Larval fat body1916 ± 1884 of 462.50Up
Larval trachea6 ± 40 of 4 0.20Down
Larval carcass25 ± 51 of 4 0.82None
S2 cells (growing)539 ± 254 of 417.60Up
Whole fly30 ± 54 of 4

Looking for FBgn0044047. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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