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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0044811 through 18771 annotations produced 1 hits



Turandot F (TotF):

Annotation Number : CG31691
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0044811
Gbrowse : chr2L:19911897-19912173 (-) // 100.0 //
Probeset : 1626526_at
Accessions : protein= NP_536780;, nucleotide= NM_080519;
Pathway : 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred fr
FlyMine data for FBgn0044811.
VDRC has 2 RNAi stocks for FBgn0044811 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 0.90None
Head2 ± 00 of 4 0.70None
Eye4 ± 10 of 4 1.14None
Thoracicoabdominal ganglion1 ± 00 of 4 0.40None
Salivary gland13 ± 30 of 4 3.38Up
Crop4 ± 10 of 4 1.10None
Midgut6 ± 20 of 4 1.50None
Tubule6 ± 00 of 4 1.60Up
Hindgut4 ± 10 of 4 1.10None
Heart2 ± 10 of 4 0.55None
Fat body5 ± 20 of 4 1.37None
Ovary1 ± 00 of 4 0.40None
Testis5 ± 10 of 4 1.30None
Male accessory glands6 ± 20 of 4 1.70None
Virgin spermatheca4 ± 00 of 4 1.21None
Mated spermatheca4 ± 10 of 4 0.99None
Adult carcass9 ± 30 of 4 2.30None
Larval CNS1 ± 00 of 4 0.36None
Larval Salivary gland5 ± 10 of 4 1.33None
Larval midgut6 ± 10 of 4 1.69None
Larval tubule3 ± 20 of 4 1.00None
Larval hindgut2 ± 10 of 4 0.74None
Larval fat body4 ± 10 of 4 1.00None
Larval trachea2 ± 10 of 4 0.62None
Larval carcass8 ± 00 of 4 2.08None
S2 cells (growing)4 ± 10 of 4 1.11None
Whole fly4 ± 10 of 4

Looking for FBgn0044811. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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