Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0044812 through 18771 annotations produced 1 hits



turandot C (TotC):

Annotation Number : CG31508
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0044812
Gbrowse : chr3R:16698709-16699310 (+) // 100.0 //
Probeset : 1639323_at
Accessions : protein= NP_536779;, nucleotide= NM_080518;
Pathway : 0005576 // extracellular region // inferred from electronic annotation /// 0005615 // extracellular space // inferred fr
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0044812.
VDRC has 2 RNAi stocks for FBgn0044812 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain59 ± 54 of 4 0.10None
Head2428 ± 3804 of 4 5.70Up
Eye2739 ± 8044 of 4 6.46None
Thoracicoabdominal ganglion59 ± 134 of 4 0.10None
Salivary gland29 ± 63 of 4 0.07None
Crop39 ± 34 of 4 0.10None
Midgut14 ± 03 of 4 0.00Down
Tubule58 ± 223 of 4 0.10Down
Hindgut46 ± 134 of 4 0.10None
Heart2431 ± 6284 of 4 5.74Up
Fat body3986 ± 7434 of 4 9.40Up
Ovary2 ± 00 of 4 0.00Down
Testis1 ± 00 of 4 0.00Down
Male accessory glands4 ± 10 of 4 0.00Down
Virgin spermatheca4630 ± 10914 of 410.92Up
Mated spermatheca3608 ± 8294 of 4 8.51Up
Adult carcass1352 ± 1544 of 4 3.20Up
Larval CNS4 ± 14 of 4 0.01Down
Larval Salivary gland6 ± 01 of 4 0.02Down
Larval midgut9 ± 13 of 4 0.02Down
Larval tubule3 ± 10 of 4 0.00Down
Larval hindgut7 ± 23 of 4 0.02Down
Larval fat body126 ± 344 of 4 0.30None
Larval trachea51 ± 903 of 4 0.12None
Larval carcass4 ± 11 of 4 0.01Down
S2 cells (growing)3 ± 00 of 4 0.01Down
Whole fly424 ± 1264 of 4

Looking for FBgn0044812. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime