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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0045468 through 18771 annotations produced 1 hits



Gustatory receptor 93d (Gr93d):

Annotation Number : CG31335
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0045468
Gbrowse : chr3R:17671175-17672381 (-) // 100.0 //
Probeset : 1629043_at
Accessions : protein= NP_732666;, nucleotide= NM_169974;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0045468.
VDRC has 2 RNAi stocks for FBgn0045468 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.40None
Head1 ± 00 of 4 0.60None
Eye0 ± 00 of 4 0.35None
Thoracicoabdominal ganglion2 ± 00 of 4 0.80None
Salivary gland2 ± 00 of 4 0.92None
Crop2 ± 00 of 4 0.80None
Midgut5 ± 10 of 4 1.90None
Tubule2 ± 00 of 4 0.90None
Hindgut2 ± 10 of 4 0.80None
Heart1 ± 10 of 4 0.55None
Fat body7 ± 20 of 4 2.79None
Ovary1 ± 00 of 4 0.40None
Testis3 ± 10 of 4 1.40None
Male accessory glands2 ± 00 of 4 0.80None
Virgin spermatheca4 ± 10 of 4 1.57None
Mated spermatheca1 ± 00 of 4 0.49None
Adult carcass2 ± 00 of 4 0.80None
Larval CNS2 ± 10 of 4 0.87None
Larval Salivary gland2 ± 00 of 4 0.77None
Larval midgut4 ± 10 of 4 1.45None
Larval tubule2 ± 00 of 4 0.80None
Larval hindgut2 ± 10 of 4 0.79None
Larval fat body2 ± 00 of 4 1.00None
Larval trachea2 ± 10 of 4 0.83None
Larval carcass2 ± 00 of 4 1.03None
S2 cells (growing)1 ± 00 of 4 0.56None
Whole fly2 ± 11 of 4

Looking for FBgn0045468. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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