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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0045471 through 18771 annotations produced 1 hits



Gustatory receptor 92a (Gr92a):

Annotation Number : CG31208
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0045471
Gbrowse : chr3R:15946781-15947822 (+) // 100.0 //
Probeset : 1626979_at
Accessions : protein= NP_732489;, nucleotide= NM_169889;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0045471.
VDRC has 3 RNAi stocks for FBgn0045471 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 02 of 4 0.80None
Head6 00 of 4 1.10None
Eye3 11 of 4 0.60None
Thoracicoabdominal ganglion8 12 of 4 1.40None
Salivary gland15 31 of 4 2.50None
Crop4 01 of 4 0.70None
Midgut9 12 of 4 1.50None
Tubule9 12 of 4 1.60None
Hindgut7 02 of 4 1.20None
Heart5 11 of 4 0.85None
Fat body12 33 of 4 2.09Up
Ovary3 01 of 4 0.70None
Testis2 00 of 4 0.40None
Male accessory glands10 31 of 4 1.80None
Virgin spermatheca10 14 of 4 1.70None
Mated spermatheca7 12 of 4 1.20None
Adult carcass9 21 of 4 1.60None
Larval CNS5 13 of 4 0.84None
Larval Salivary gland2 10 of 4 0.46None
Larval midgut3 10 of 4 0.65None
Larval tubule10 04 of 4 1.70None
Larval hindgut3 01 of 4 0.65None
Larval fat body10 12 of 4 1.70None
Larval trachea3 10 of 4 0.53None
Larval carcass3 10 of 4 0.62None
S2 cells (growing)3 00 of 4 0.60None
Whole fly6 12 of 4

Looking for FBgn0045471. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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